RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 K7EM74 188 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 CCKP06307 115 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 APELAP0DMC3 54 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 DCANP1Q8TF63 244 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 IGKV6-21A0A0C4DH24 114 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 PRR32B1ATL7 298 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 H0Y9J4 135 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 SMCPP49901 116 aaPredicted RBP3.35□□□□□ -1.87
SCN3A-209ENST00000639244 SS18Q15532 418 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 A0A1B0GXF2 115 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 SRRM4A7MD48 611 aaKnown RBP3.35□□□□□ -1.87
SCN3A-209ENST00000639244 M0R381 172 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 NXPH4O95158 308 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 RFESDQ8TAC1 157 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 IGKV6D-21A0A0A0MT36 114 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 A8MUN3 132 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 DAND5Q8N907 189 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 PGLYRP4Q96LB8 373 aa3.35□□□□□ -1.87
SCN3A-209ENST00000639244 EPG5Q9HCE0 2579 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 LINC01356Q8N9X3 169 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 Q9Y3F1 56 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 RHOHQ15669 191 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 ABCA2Q9BZC7 2435 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 TRBV5-7A0A0A0MS05 114 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 TRAV3A0A0B4J244 114 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 TRBV10-2A0A0K0K1G8 114 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 IQCF6A8MYZ5 107 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 WISP1O95388 367 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 MORN5Q5VZ52 161 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 EFNA4P52798 201 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 MPLKIPQ8TAP9 179 aa3.34□□□□□ -1.87
SCN3A-209ENST00000639244 COX7A2LO14548 114 aa3.34□□□□□ -1.88
SCN3A-209ENST00000639244 PIN1P1O15428 100 aa3.34□□□□□ -1.88
SCN3A-209ENST00000639244 NPCDR1Q9BY65 106 aa3.34□□□□□ -1.88
SCN3A-209ENST00000639244 LTAP01374 205 aa3.34□□□□□ -1.88
SCN3A-209ENST00000639244 RIGQ13278 110 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 PIK3CD-AS1Q5SR53 167 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 SLC48A1Q6P1K1 146 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 ZFP2Q6ZN57 461 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 NDUFA11Q86Y39 141 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 IFI6P09912 130 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 ARL14EPLP0DKL9 152 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 SLC25A16P16260 332 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 FAM120AOSQ5T036 256 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 SP5Q6BEB4 398 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-209ENST00000639244 PSENENQ9NZ42 101 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 A0A0A6YYD4 124 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 WISP3O95389 354 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-209ENST00000639244 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
SCN3A-209ENST00000639244 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 PRYO14603 147 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 C16orf47Q6ZP98 133 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF503Q96F45 646 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 LTBP4Q8N2S1 1624 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 C20orf197Q8N268 126 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 CD177Q8N6Q3 437 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 CACNA1AO00555 2505 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 C1orf100Q5SVJ3 147 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 FGFBP3Q8TAT2 258 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 C6orf106Q9H6K1 298 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV3-43A0A0B4J1X8 118 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF883P0CG24 379 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV3-43DP0DP04 118 aa3.33□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV4-39P01824 125 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 C11orf52Q96A22 123 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 ZFHX3Q15911 3703 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 AVPP01185 164 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 ESRGQ1W209 222 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 RSPO4Q2I0M5 234 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-209ENST00000639244 LCA10Q71F78 164 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 VN1R4Q7Z5H5 301 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 GFRA4Q9GZZ7 299 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 FGF22Q9HCT0 170 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
SCN3A-209ENST00000639244 SPTBN4Q9H254 2564 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 HTN1P15515 57 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 MRPL51Q4U2R6 128 aaKnown RBP3.32□□□□□ -1.88
SCN3A-209ENST00000639244 ATP1A1-AS1Q5TC04 95 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 C18orf12Q96KH6 178 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 C16orf95Q9H693 158 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF138P52744 262 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 FXYD3Q14802 87 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 UBR5O95071 2799 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-209ENST00000639244 PATE4P0C8F1 98 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 GPHA2Q96T91 129 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF492Q9P255 531 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 H7C2G1 150 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 LST1O00453 97 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
SCN3A-209ENST00000639244 A0A0G2JNJ9 132 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 ATP11AUNQ6ZP68 121 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF818PQ6ZRF7 136 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 Q9UFV3 132 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 IGKV3-7A0A075B6H7 116 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms