RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KLF17Q5JT82 389 aaPredicted RBP6.85□□□□□ -1.31
VPS11-206ENST00000614944 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 ZNF747Q9BV97 191 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 RETNQ9HD89 108 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 NCR2O95944 276 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 IL4P05112 153 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 PRCDQ00LT1 54 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
VPS11-206ENST00000614944 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 IGHV1-69DA0A0B4J2H0 117 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 LINC01548A6NM66 108 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 H3BVH4 76 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 K7EMI3 77 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 OVOL1O14753 267 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 IGHV1-69P01742 117 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 GDF5OSQ5U4N7 250 aa6.85□□□□□ -1.31
VPS11-206ENST00000614944 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
VPS11-206ENST00000614944 IAPPP10997 89 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 PFN2P35080 140 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 FOXA3P55318 350 aaPredicted RBP6.84□□□□□ -1.31
VPS11-206ENST00000614944 MRGPRG-AS1Q2M3A8 158 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 LGALS9BQ3B8N2 356 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 LGALS9CQ6DKI2 356 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 ODF3Q96PU9 254 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 ZNF580Q9UK33 172 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 EPDR1Q9UM22 224 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 ABCA4P78363 2273 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 ZNF462Q96JM2 2506 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 TRACP01848 142 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 SAA1P0DJI8 122 aaPredicted RBP6.84□□□□□ -1.31
VPS11-206ENST00000614944 TMEM258P61165 79 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 SBSPONQ8IVN8 264 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
VPS11-206ENST00000614944 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 SRRM4A7MD48 611 aaKnown RBP6.83□□□□□ -1.32
VPS11-206ENST00000614944 J3QQQ9 107 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 IGKV1-16P04430 117 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 IGHV4-31P0DP07 118 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 PSMG4Q5JS54 123 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 MORN3Q6PF18 240 aaPredicted RBP6.83□□□□□ -1.32
VPS11-206ENST00000614944 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 NDUFA4L2Q9NRX3 87 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 CENPWQ5EE01 88 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 C11orf52Q96A22 123 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 ZNRD1Q9P1U0 126 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 OXTP01178 125 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 CRYGAP11844 174 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 DEFA4P12838 97 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 COX7A1P24310 79 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 GCHFRP30047 84 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 SPANXN5Q5MJ07 72 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 TP53TG1Q9Y2A0 90 aa6.83□□□□□ -1.32
VPS11-206ENST00000614944 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 C15orf62A8K5M9 175 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 LTAP01374 205 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 LINC00205P59089 165 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 C2orf83Q53S99 150 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 ADGRG4Q8IZF6 3080 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 CR1P17927 2039 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 TRBV25-1A0A075B6N4 114 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 MPDU1O75352 247 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 CRIP2P52943 208 aaPredicted RBP6.82□□□□□ -1.32
VPS11-206ENST00000614944 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 LSM4Q9Y4Z0 139 aaKnown RBP6.82□□□□□ -1.32
VPS11-206ENST00000614944 FAM208BQ5VWN6 2430 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 TRBV7-7A0A0K0K1E9 115 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 PRSS46E5RG02 174 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 TIMM23O14925 209 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 HOXA3O43365 443 aaPredicted RBP6.82□□□□□ -1.32
VPS11-206ENST00000614944 TMEM158Q8WZ71 300 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 NPIPB3Q92617 1050 aa6.82□□□□□ -1.32
VPS11-206ENST00000614944 USP9XQ93008 2570 aaPredicted RBP6.81□□□□□ -1.32
VPS11-206ENST00000614944 PRRC2AP48634 2157 aaKnown RBP6.81□□□□□ -1.32
VPS11-206ENST00000614944 AMN1Q8IY45 258 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 PKDREJQ9NTG1 2253 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 A8MZ25 164 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 COX7CP15954 63 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 SAA4P35542 130 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
VPS11-206ENST00000614944 TRAV13-1A0A0B4J241 112 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 DPM2O94777 84 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 ATP5G1P05496 136 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 NPCDR1Q9BY65 106 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 ZNF256Q9Y2P7 627 aaPredicted RBP6.8□□□□□ -1.32
VPS11-206ENST00000614944 MALRD1Q5VYJ5 2156 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 HAX1O00165 279 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 FCER1GP30273 86 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 ZNF138P52744 262 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 CACNG7P62955 275 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 PIP4P2Q8N4L2 257 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 RELNP78509 3460 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 TRAV3A0A0B4J244 114 aa6.8□□□□□ -1.32
VPS11-206ENST00000614944 IZUMO4Q1ZYL8 232 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms