RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 FAM104BQ5XKR9 115 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 EBLN2Q6P2I7 272 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 LCA10Q71F78 164 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 ZCCHC24Q8N2G6 241 aaKnown RBP2.46□□□□□ -2.02
VMP1-212ENST00000591782 TMEM252Q8N6L7 170 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 OR8A1Q8NGG7 326 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 ZNF563Q8TA94 476 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 DYNLRB2Q8TF09 96 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 FAM19A4Q96LR4 140 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 CCL13Q99616 98 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 TM2D3Q9BRN9 247 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 DPH3P1Q9H4G8 78 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 TAS2R4Q9NYW5 299 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 CALYQ9NYX4 217 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 V9GY05 133 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 DOCK11Q5JSL3 2073 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 COL18A1P39060 1754 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 BCORQ6W2J9 1755 aa2.46□□□□□ -2.02
VMP1-212ENST00000591782 PRRC2AP48634 2157 aaKnown RBP2.46□□□□□ -2.02
VMP1-212ENST00000591782 OBSL1O75147 1896 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 PLXNA3P51805 1871 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 PIEZO1Q92508 2521 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 C2orf16Q68DN1 1984 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 DOCK8Q8NF50 2099 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 BAZ2BQ9UIF8 2168 aaKnown RBP2.45□□□□□ -2.02
VMP1-212ENST00000591782 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 A0A1B0GWA3 101 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 H0Y9J4 135 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 M0R381 172 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 SLC25A20O43772 301 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 NUPR1O60356 82 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 BCE1O60756 84 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 TCL1BO95988 128 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 NPYP01303 97 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 P0C879 139 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 COL8A2P25067 703 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 RPL18Q07020 188 aaKnown RBP2.45□□□□□ -2.02
VMP1-212ENST00000591782 CIRBPQ14011 172 aaKnown RBP2.45□□□□□ -2.02
VMP1-212ENST00000591782 ZNF56Q15929 161 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 NSUN5P1Q3KNT7 163 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 TMEM52BQ4KMG9 183 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 S100A7L2Q5SY68 101 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 C9orf129Q5T035 196 aaKnown RBP2.45□□□□□ -2.02
VMP1-212ENST00000591782 NCBP2-AS2Q69YL0 99 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 RPP25LQ8N5L8 163 aaKnown RBP2.45□□□□□ -2.02
VMP1-212ENST00000591782 IFI27L1Q96BM0 104 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 SPACA5Q96QH8 159 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 HIST1H4GQ99525 98 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 SCN3AQ9NY46 2000 aa2.45□□□□□ -2.02
VMP1-212ENST00000591782 RANBP2P49792 3224 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 MGAMO43451 1857 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 IGHV3OR15-7A0A075B7D8 119 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 TRAV3A0A0B4J244 114 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 MYMXA0A1B0GTQ4 84 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 RBMY1BA6NDE4 496 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 RBMY1EA6NEQ0 496 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 C2orf70A6NJV1 201 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 H3BVH4 76 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 J3QLW9 94 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 COX7A2LO14548 114 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 PSPHP1O15172 72 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 CCL16O15467 120 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 RBMY1DP0C7P1 496 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 RBMY1A1P0DJD3 496 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 RBMY1CP0DJD4 496 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 MGST1P10620 155 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 DYNLT3P51808 116 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 NCBP2P52298 156 aaKnown RBP eCLIP2.44□□□□□ -2.029e-9■□□□□ 10.2
VMP1-212ENST00000591782 KRTAP12-2P59991 146 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 ZNF117Q03924 483 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 RBMY1FQ15415 496 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 ATXN8Q156A1 80 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 SP6Q3SY56 376 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 SLC48A1Q6P1K1 146 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 C7orf65Q6ZTY9 151 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 MDP1Q86V88 176 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 MKXQ8IYA7 352 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 C3orf56Q8N813 242 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 TMEM75Q8N9X5 138 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 CCL17Q92583 94 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 LINC01600Q96MT4 127 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 RNF126Q9BV68 326 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 PARP12Q9H0J9 701 aaKnown RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 DPM3Q9P2X0 92 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 SLC25A15Q9Y619 301 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 CENPFP49454 3210 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 COL1A1P02452 1464 aaPredicted RBP2.44□□□□□ -2.02
VMP1-212ENST00000591782 C5orf42Q9H799 3197 aa2.44□□□□□ -2.02
VMP1-212ENST00000591782 CFAP47Q6ZTR5 3102 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 PLXNB3Q9ULL4 1909 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 LOC107984156A0A0G2JMH3 177 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 CTXND1A0A1B0GTU2 59 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 TCRBV4S1A1TA0A5B7 111 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 LST1O00453 97 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 HCRTO43612 131 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 CPSF4O95639 269 aaKnown RBP2.43□□□□□ -2.02
VMP1-212ENST00000591782 COX6CP09669 75 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 IGHV1-2P23083 117 aa2.43□□□□□ -2.02
VMP1-212ENST00000591782 S100A3P33764 101 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms