RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 HSPB11Q9Y547 144 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 PDCD11Q14690 1871 aaKnown RBP2.39□□□□□ -2.03
TUBD1-208ENST00000588009 C1orf196B1AJZ1 125 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 C19orf84I3L1E1 186 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 OBSL1O75147 1896 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 C1QCP02747 245 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 METTL15P1P0C7V9 234 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 RRN3P1Q2M238 152 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 LYRM7Q5U5X0 104 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 NUP35Q8NFH5 326 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 TSTD1Q8NFU3 115 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 STAG3L4Q8TBR4 150 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 OR52A1Q9UKL2 312 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 TRRAPQ9Y4A5 3859 aa2.38□□□□□ -2.03
TUBD1-208ENST00000588009 CCDC88CQ9P219 2028 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 MUC2Q02817 5179 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 DUXBA0A1W2PPF3 345 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 M0R378 163 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 KPNA4O00629 521 aaPredicted RBP2.37□□□□□ -2.03
TUBD1-208ENST00000588009 TAX1BP3O14907 124 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 DHFRP00374 187 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 RPL7P18124 248 aaKnown RBP2.37□□□□□ -2.03
TUBD1-208ENST00000588009 INSL3P51460 131 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 SCGB2B2Q4G0G5 96 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 KHDC3LQ587J8 217 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 LCN15Q6UWW0 184 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 DHFR2Q86XF0 187 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 THEM6Q8WUY1 208 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 SKA2Q8WVK7 121 aaPredicted RBP2.37□□□□□ -2.03
TUBD1-208ENST00000588009 CCDC115Q96NT0 180 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 GPX7Q96SL4 187 aaPredicted RBP2.37□□□□□ -2.03
TUBD1-208ENST00000588009 ASB4Q9Y574 426 aa2.37□□□□□ -2.03
TUBD1-208ENST00000588009 EML6Q6ZMW3 1958 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 A0A087WX48 190 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 A0A087X0T9 212 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 IBA57-AS1B1ANH7 110 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 E7EQ34 232 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 CYB5BO43169 146 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 SHBGP04278 402 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 HTR1AP08908 422 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 CD52P31358 61 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 RNASE4P34096 147 aaKnown RBP2.36□□□□□ -2.03
TUBD1-208ENST00000588009 DPPA3Q6W0C5 159 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 OR8B3Q8NGG8 313 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 OR5A1Q8NGJ0 315 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 AIF1LQ9BQI0 150 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 MED11Q9P086 117 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 CEP192Q8TEP8 1941 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 RP1P56715 2156 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 ABCA13Q86UQ4 5058 aa2.36□□□□□ -2.03
TUBD1-208ENST00000588009 ROCK2O75116 1388 aaKnown RBP2.36□□□□□ -2.03
TUBD1-208ENST00000588009 DMBT1Q9UGM3 2413 aaPredicted RBP2.35□□□□□ -2.03
TUBD1-208ENST00000588009 A0A0D9SG52 128 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 H7BYZ3 331 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 SDCBPO00560 298 aaPredicted RBP2.35□□□□□ -2.03
TUBD1-208ENST00000588009 ZNF737O75373 536 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 TCL1BO95988 128 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 APOA2P02652 100 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 HMGN1P05114 100 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 CRYGAP11844 174 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 COX6A1P12074 109 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 RPS3P23396 243 aaKnown RBP eCLIP2.35□□□□□ -2.03
TUBD1-208ENST00000588009 ZNF345Q14585 488 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 NNATQ16517 81 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 AAED1Q7RTV5 226 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 OR8D4Q8NGM9 314 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 MAFIPQ8WZ33 124 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 OR2J1Q9GZK6 312 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 JPT1Q9UK76 154 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 ABCA1O95477 2261 aa2.35□□□□□ -2.03
TUBD1-208ENST00000588009 NUP210Q8TEM1 1887 aaPredicted RBP2.35□□□□□ -2.03
TUBD1-208ENST00000588009 MYH10P35580 1976 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 TMEM212A6NML5 194 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 CCL16O15467 120 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 CST8O60676 142 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 PMP2P02689 132 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 PRB4P10163 310 aaPredicted RBP2.34□□□□□ -2.03
TUBD1-208ENST00000588009 OGNP20774 298 aaKnown RBP2.34□□□□□ -2.03
TUBD1-208ENST00000588009 POLR2HP52434 150 aaKnown RBP2.34□□□□□ -2.03
TUBD1-208ENST00000588009 C9orf163Q8N9P6 203 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 OR4E2Q8NGC2 313 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 MBD3L1Q8WWY6 194 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 ZC2HC1AQ96GY0 325 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 CCDC32Q9BV29 185 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 RTL8AQ9BWD3 113 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 CST9LQ9H4G1 147 aa2.34□□□□□ -2.03
TUBD1-208ENST00000588009 CACNA1CQ13936 2221 aa2.34□□□□□ -2.04
TUBD1-208ENST00000588009 TMEM256-PLSCR3K7ERE1 68 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 PFDN1O60925 122 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 TNFSF15O95150 251 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 TRGC2P03986 189 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 OR10J4P0C629 311 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 NFYBP25208 207 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 SMCO1Q147U7 214 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 HRCT1Q6UXD1 115 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 Q6ZQT0 140 aa2.33□□□□□ -2.04
TUBD1-208ENST00000588009 TEX37Q96LM6 180 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms