RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TP53TG1Q9Y2A0 90 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 FREM2Q5SZK8 3169 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 TRAV12-3A0A0B4J271 114 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 A0A0U1RRA0 63 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 OVOL1O14753 267 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 IGLV1-47P01700 117 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 CRIP1P50238 77 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 RRN3P1Q2M238 152 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 MRAP2Q96G30 205 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
USB1-212ENST00000566082 SNRPD3P62318 126 aaKnown RBP8.22□□□□□ -1.09
USB1-212ENST00000566082 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 IGFL2Q6UWQ7 119 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 FOXI2Q6ZQN5 318 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 IGHV3OR16-12A0A075B7B8 117 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 TMEM262E9PQX1 116 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 M0R1W7 72 aa8.22□□□□□ -1.09
USB1-212ENST00000566082 FCN3O75636 299 aa8.21□□□□□ -1.09
USB1-212ENST00000566082 SAA4P35542 130 aa8.21□□□□□ -1.09
USB1-212ENST00000566082 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.09
USB1-212ENST00000566082 Q71RC1 249 aaPredicted RBP8.21□□□□□ -1.09
USB1-212ENST00000566082 IGKV2D-26A0A0A0MRZ7 120 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 MINOS1Q5TGZ0 78 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 BRD3OSQ6XYD6 125 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 LINC00477Q96M19 166 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 MINOS1-NBL1R4GNA1 71 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 SORL1Q92673 2214 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 ZNF688P0C7X2 276 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 IGFL3Q6UXB1 125 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 C7orf69Q9H7B7 122 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 TNFRSF18Q9Y5U5 241 aa8.21□□□□□ -1.1
USB1-212ENST00000566082 OOSP1A8MZH6 123 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 PRSS29PA6NIE9 313 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 VCYO14598 125 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 CTSGP08311 255 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 TAL2Q16559 108 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 ANXA2RQ3ZCQ2 193 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 WNK1Q9H4A3 2382 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 IGLV11-55A0A075B6I3 123 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 IGHV3-73A0A0B4J1V6 119 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 SHISA9B4DS77 424 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 IGLV2-11P01706 119 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 KLHL30-AS1Q8NEE0 82 aa8.2□□□□□ -1.1
USB1-212ENST00000566082 PTPRQQ9UMZ3 2332 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 TRBV7-1A0A0A6YYK4 115 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 FGF6P10767 208 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
USB1-212ENST00000566082 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 RPL39LQ96EH5 51 aaKnown RBP8.19□□□□□ -1.1
USB1-212ENST00000566082 CD28P10747 220 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 FAM110DQ8TAY7 271 aaPredicted RBP8.19□□□□□ -1.1
USB1-212ENST00000566082 FAM208BQ5VWN6 2430 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 LOC400499M0QZD8 3231 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 ATRXP46100 2492 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 F6UB75 175 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 HIGD1BQ9P298 99 aa8.19□□□□□ -1.1
USB1-212ENST00000566082 CEP295Q9C0D2 2601 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 WI2-2373I1.2A0A1W2PRP0 233 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 PRO3102Q9H379 93 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 ACACBO00763 2458 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 TSPAN13O95857 204 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 GRNP28799 593 aaKnown RBP8.18□□□□□ -1.1
USB1-212ENST00000566082 SPXQ9BT56 116 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 RHPN1-AS1Q9BWJ2 59 aa8.18□□□□□ -1.1
USB1-212ENST00000566082 TRAV8-4A0A0B4J246 113 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 TRBV6-1A0A0K0K1D8 114 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 NPFFO15130 113 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 OVOL3O00110 214 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 GNRH2O43555 120 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 DYNLRB2Q8TF09 96 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 MOB4Q9Y3A3 225 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 PMVKQ15126 192 aa8.17□□□□□ -1.1
USB1-212ENST00000566082 BUB3O43684 328 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 DEFB1P60022 68 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 TMEM95Q3KNT9 176 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 ATP5J2P56134 94 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 PTH2Q96A98 100 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 DUX5Q96PT3 197 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 DUX3Q96PT4 197 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 SPAG8Q99932 426 aaPredicted RBP8.16□□□□□ -1.1
USB1-212ENST00000566082 BPESC1Q9GZL8 116 aa8.16□□□□□ -1.1
USB1-212ENST00000566082 IGF2RP11717 2491 aa8.15□□□□□ -1.1
USB1-212ENST00000566082 CACNA1AO00555 2505 aa8.15□□□□□ -1.1
USB1-212ENST00000566082 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
USB1-212ENST00000566082 GAS8-AS1O95177 125 aa8.15□□□□□ -1.1
USB1-212ENST00000566082 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
USB1-212ENST00000566082 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms