RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 HLA-DRB4X5D2U9 266 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 C7orf71A4D174 169 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 SAP30O75446 220 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 OR5AL1P0C617 328 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 CD33P20138 364 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 KRTAP10-3P60369 221 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 DNLZQ5SXM8 178 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 PRR9Q5T870 116 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 HIST2H2BDQ6DRA6 164 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-210ENST00000564587 SPATA3Q8NHX4 192 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-210ENST00000564587 MAP6D1Q9H9H5 199 aa11.58□□□□□ -0.56
COMMD4-210ENST00000564587 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-210ENST00000564587 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
COMMD4-210ENST00000564587 S100A2P29034 98 aa11.57□□□□□ -0.56
COMMD4-210ENST00000564587 C11orf21Q9P2W6 132 aa11.57□□□□□ -0.56
COMMD4-210ENST00000564587 GRIFINA4D1Z8 144 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 H3BMM0 161 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 SNAI2O43623 268 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 ASIPP42127 132 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 INSL3P51460 131 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 SLAQ13239 276 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 FAM159AQ6UWV7 190 aa11.56□□□□□ -0.56
COMMD4-210ENST00000564587 NSD1Q96L73 2696 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-210ENST00000564587 IGHV4-4A0A075B6R2 117 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 OR11H12B2RN74 326 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 J3KRW8 73 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 AMBPP02760 352 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 TWIST1Q15672 202 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 AMTNQ6UX39 209 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 ZNF575Q86XF7 245 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 LINC00482Q8N8I6 264 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 CITED1Q99966 193 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 NBEAL1Q6ZS30 2694 aa11.55□□□□□ -0.56
COMMD4-210ENST00000564587 LOC102724200A0A096LPH7 203 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-210ENST00000564587 NTF3P20783 257 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
COMMD4-210ENST00000564587 SRIP30626 198 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 BAGE3Q86Y29 109 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 TMEM191AQ9H0A3 160 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 JMJD1CQ15652 2540 aa11.54□□□□□ -0.56
COMMD4-210ENST00000564587 KNCNA6PVL3 124 aa11.53□□□□□ -0.56
COMMD4-210ENST00000564587 ZNF324O75467 553 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-210ENST00000564587 AKR1D1P51857 326 aa11.53□□□□□ -0.56
COMMD4-210ENST00000564587 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
COMMD4-210ENST00000564587 GFI1BQ5VTD9 330 aa11.53□□□□□ -0.56
COMMD4-210ENST00000564587 C20orf144Q9BQM9 153 aa11.53□□□□□ -0.56
COMMD4-210ENST00000564587 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-210ENST00000564587 FBN1P35555 2871 aaKnown RBP11.53□□□□□ -0.56
COMMD4-210ENST00000564587 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
COMMD4-210ENST00000564587 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
COMMD4-210ENST00000564587 ESDP10768 282 aa11.52□□□□□ -0.57
COMMD4-210ENST00000564587 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
COMMD4-210ENST00000564587 TMEM18Q96B42 140 aa11.52□□□□□ -0.57
COMMD4-210ENST00000564587 SPINK13Q1W4C9 94 aa11.51□□□□□ -0.57
COMMD4-210ENST00000564587 BEAN1Q3B7T3 259 aa11.51□□□□□ -0.57
COMMD4-210ENST00000564587 ODF3L2Q3SX64 289 aa11.51□□□□□ -0.57
COMMD4-210ENST00000564587 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
COMMD4-210ENST00000564587 SPANXN1Q5VSR9 72 aa11.51□□□□□ -0.57
COMMD4-210ENST00000564587 STHQ8IWL8 128 aa11.51□□□□□ -0.57
COMMD4-210ENST00000564587 MCRIP2Q9BUT9 160 aaKnown RBP11.51□□□□□ -0.57
COMMD4-210ENST00000564587 WNK1Q9H4A3 2382 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 TRGV11A0A075B6L2 103 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 H3BVH4 76 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 M0R2Z0 102 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 PPBPP02775 128 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
COMMD4-210ENST00000564587 KIR3DS1Q14943 382 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 MUC21Q5SSG8 566 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 C18orf32Q8TCD1 76 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-210ENST00000564587 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
COMMD4-210ENST00000564587 Q6ZQT7 251 aa11.49□□□□□ -0.57
COMMD4-210ENST00000564587 SORL1Q92673 2214 aa11.49□□□□□ -0.57
COMMD4-210ENST00000564587 STAB1Q9NY15 2570 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 CD7P09564 240 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 ORMDL3Q8N138 153 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 OR10AG1Q8NH19 301 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 LINC00467Q9BRT7 94 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 U3KQK5 164 aa11.48□□□□□ -0.57
COMMD4-210ENST00000564587 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 GNRH2O43555 120 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 SERF1AO75920 110 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 INSP01308 110 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 RNASE3P12724 160 aaKnown RBP11.47□□□□□ -0.57
COMMD4-210ENST00000564587 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 358.9 ms