RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 DEFB131AP59861 70 aa7.07□□□□□ -1.28
CDH13-205ENST00000562307 Q6ZQT7 251 aa7.07□□□□□ -1.28
CDH13-205ENST00000562307 HIST3H2BBQ8N257 126 aa7.07□□□□□ -1.28
CDH13-205ENST00000562307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.07□□□□□ -1.28
CDH13-205ENST00000562307 MAP6D1Q9H9H5 199 aa7.07□□□□□ -1.28
CDH13-205ENST00000562307 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
CDH13-205ENST00000562307 IGHV4-4A0A075B6R2 117 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 IFITM10A6NMD0 228 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 ZNF324O75467 553 aaPredicted RBP7.06□□□□□ -1.28
CDH13-205ENST00000562307 MED14OSP0DP75 135 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 CMC4P56277 68 aaPredicted RBP7.06□□□□□ -1.28
CDH13-205ENST00000562307 KIR3DS1Q14943 382 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 OR10J3Q5JRS4 329 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 CITED1Q99966 193 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
CDH13-205ENST00000562307 ALKBH7Q9BT30 221 aaPredicted RBP7.06□□□□□ -1.28
CDH13-205ENST00000562307 NIPBLQ6KC79 2804 aaeCLIP7.05□□□□□ -1.28
CDH13-205ENST00000562307 LOC102724200A0A096LPH7 203 aaPredicted RBP7.05□□□□□ -1.28
CDH13-205ENST00000562307 C7orf71A4D174 169 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 KNCNA6PVL3 124 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 ESDP10768 282 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 NTF3P20783 257 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 CDKN1BP46527 198 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 TDRG1Q3Y452 100 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 ANXA2RQ3ZCQ2 193 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 GFI1BQ5VTD9 330 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 TPPP3Q9BW30 176 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
CDH13-205ENST00000562307 J3KRW8 73 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 SAP30O75446 220 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 SRIP30626 198 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 CACNG7P62955 275 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 BEAN1Q3B7T3 259 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 ODF3L2Q3SX64 289 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 DMRTA1Q5VZB9 504 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 FAM104BQ5XKR9 115 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 KCNS1Q96KK3 526 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 TMEM191AQ9H0A3 160 aa7.04□□□□□ -1.28
CDH13-205ENST00000562307 TRAV12-3A0A0B4J271 114 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 RBMY1BA6NDE4 496 aaKnown RBP7.03□□□□□ -1.28
CDH13-205ENST00000562307 RBMY1EA6NEQ0 496 aaKnown RBP7.03□□□□□ -1.28
CDH13-205ENST00000562307 IGKV3-20P01619 116 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 PF4P02776 101 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 RBMY1DP0C7P1 496 aaKnown RBP7.03□□□□□ -1.28
CDH13-205ENST00000562307 ASIPP42127 132 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 LINC00310P59036 64 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 TWIST1Q15672 202 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 U3KQK5 164 aa7.03□□□□□ -1.28
CDH13-205ENST00000562307 SETD2Q9BYW2 2564 aaPredicted RBP7.03□□□□□ -1.28
CDH13-205ENST00000562307 C2CD3Q4AC94 2353 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 OR11H12B2RN74 326 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 M0R2Z0 102 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 CRXO43186 299 aaPredicted RBP7.02□□□□□ -1.29
CDH13-205ENST00000562307 GNRH2O43555 120 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 NUPR1O60356 82 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
CDH13-205ENST00000562307 INSL3P51460 131 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 ZNF124Q15973 351 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 SPINK13Q1W4C9 94 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 MUC21Q5SSG8 566 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 FAM159AQ6UWV7 190 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
CDH13-205ENST00000562307 HIST1H2BLQ99880 126 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 MSRB1Q9NZV6 116 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 NAGKQ9UJ70 344 aa7.02□□□□□ -1.29
CDH13-205ENST00000562307 F8P00451 2351 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 IGHV1OR15-1A0A075B7D0 117 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 H3BVH4 76 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 SERF1AO75920 110 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 NXPH4O95158 308 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 AMBPP02760 352 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 S100A2P29034 98 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 AKR1D1P51857 326 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 TRPT1Q86TN4 253 aaKnown RBP7.01□□□□□ -1.29
CDH13-205ENST00000562307 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 OR10AG1Q8NH19 301 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 RNF185Q96GF1 192 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 C20orf144Q9BQM9 153 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 LINC00467Q9BRT7 94 aa7.01□□□□□ -1.29
CDH13-205ENST00000562307 TEP1Q99973 2627 aaKnown RBP7.01□□□□□ -1.29
CDH13-205ENST00000562307 IGHV3-16A0A0C4DH30 117 aa7□□□□□ -1.29
CDH13-205ENST00000562307 RAB4AP20338 218 aa7□□□□□ -1.29
CDH13-205ENST00000562307 S100A4P26447 101 aaKnown RBP7□□□□□ -1.29
CDH13-205ENST00000562307 RIPPLY3P57055 190 aa7□□□□□ -1.29
CDH13-205ENST00000562307 MRPL51Q4U2R6 128 aaKnown RBP7□□□□□ -1.29
CDH13-205ENST00000562307 PDZD11Q5EBL8 140 aa7□□□□□ -1.29
CDH13-205ENST00000562307 SPANXN1Q5VSR9 72 aa7□□□□□ -1.29
CDH13-205ENST00000562307 AMN1Q8IY45 258 aa7□□□□□ -1.29
CDH13-205ENST00000562307 WFDC9Q8NEX5 89 aa7□□□□□ -1.29
CDH13-205ENST00000562307 TMEM18Q96B42 140 aa7□□□□□ -1.29
CDH13-205ENST00000562307 C9orf85Q96MD7 179 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms