RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SPINK4O60575 86 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 TSPOP30536 169 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 NEU1Q99519 415 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 CTDSP1Q9GZU7 261 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 MUC21A0A0G2JKD1 596 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 MUC21A0A140T8X8 626 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 TMEM189A5PLL7 270 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 PPP1R2P9O14990 202 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 FRMD6-AS1P0C7T7 363 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 HTN1P15515 57 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 LINC01559Q495D7 138 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 TMEM242Q9NWH2 141 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 IL36BQ9NZH7 164 aa7.84□□□□□ -1.15
TDP1-211ENST00000555178 IGHV3OR16-12A0A075B7B8 117 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 GNRH2O43555 120 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 CXCL1P09341 107 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 SSTP61278 116 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 ELOBQ15370 118 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 YPEL4Q96NS1 127 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 CLUHP3Q96NS8 147 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 TPPP3Q9BW30 176 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 SMCO4Q9NRQ5 59 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 A0A1W2PPQ1 181 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 C1orf158Q8N1D5 194 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 TSKUQ8WUA8 353 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 TUBA4BQ9H853 241 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 RETNQ9HD89 108 aa7.83□□□□□ -1.16
TDP1-211ENST00000555178 SMIM27A0A1W2PRY6 76 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 TYMSP04818 313 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 CSNK1G2-AS1Q8NCQ2 148 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 NUP35Q8NFH5 326 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 PGLYRP4Q96LB8 373 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 TIMM8BQ9Y5J9 83 aaPredicted RBP7.82□□□□□ -1.16
TDP1-211ENST00000555178 MUC4Q99102 2169 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 LOC102724200A0A096LPH7 203 aaPredicted RBP7.82□□□□□ -1.16
TDP1-211ENST00000555178 INSP01308 110 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 CT83Q5H943 113 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 DEFB121Q5J5C9 76 aa7.82□□□□□ -1.16
TDP1-211ENST00000555178 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
TDP1-211ENST00000555178 A8MWL6 223 aa7.81□□□□□ -1.16
TDP1-211ENST00000555178 H3BVH4 76 aa7.81□□□□□ -1.16
TDP1-211ENST00000555178 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
TDP1-211ENST00000555178 FAM159AQ6UWV7 190 aa7.81□□□□□ -1.16
TDP1-211ENST00000555178 MRAPQ8TCY5 172 aa7.81□□□□□ -1.16
TDP1-211ENST00000555178 FBN3Q75N90 2809 aa7.81□□□□□ -1.16
TDP1-211ENST00000555178 HUWE1Q7Z6Z7 4374 aaKnown RBP7.81□□□□□ -1.16
TDP1-211ENST00000555178 IGHV1OR15-1A0A075B7D0 117 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 DEFA6Q01524 100 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 DEFB135Q30KP9 77 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
TDP1-211ENST00000555178 SBSPONQ8IVN8 264 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 CSTL1Q9H114 145 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 MDFICQ9P1T7 246 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 CXorf65A6NEN9 183 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 COLCA2A8K830 154 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 ARMS2P0C7Q2 107 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 AZU1P20160 251 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 LYZL1Q6UWQ5 148 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 LINC01587Q99440 93 aa7.8□□□□□ -1.16
TDP1-211ENST00000555178 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
TDP1-211ENST00000555178 KCNIP4Q6PIL6 250 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 TMEM208Q9BTX3 173 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 NAT8BQ9UHF3 227 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 TGP01266 2768 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 CBY3A6NI87 242 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 A8MZ25 164 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 S100PP25815 95 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 TDRG1Q3Y452 100 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 MORN3Q6PF18 240 aaPredicted RBP7.79□□□□□ -1.16
TDP1-211ENST00000555178 FER1L6-AS1Q8NA97 138 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 OR10AG1Q8NH19 301 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 IMMP2LQ96T52 175 aa7.79□□□□□ -1.16
TDP1-211ENST00000555178 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
TDP1-211ENST00000555178 GFRA4Q9GZZ7 299 aa7.78□□□□□ -1.16
TDP1-211ENST00000555178 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
TDP1-211ENST00000555178 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
TDP1-211ENST00000555178 AMBPP02760 352 aa7.78□□□□□ -1.16
TDP1-211ENST00000555178 ASIPP42127 132 aa7.78□□□□□ -1.16
TDP1-211ENST00000555178 RPS20P60866 119 aaKnown RBP7.78□□□□□ -1.16
TDP1-211ENST00000555178 S100A4P26447 101 aaKnown RBP7.77□□□□□ -1.17
TDP1-211ENST00000555178 CTRLP40313 264 aa7.77□□□□□ -1.17
TDP1-211ENST00000555178 FOXA3P55318 350 aaPredicted RBP7.77□□□□□ -1.17
TDP1-211ENST00000555178 FAM210BQ96KR6 192 aa7.77□□□□□ -1.17
TDP1-211ENST00000555178 PYGO2Q9BRQ0 406 aa7.77□□□□□ -1.17
TDP1-211ENST00000555178 ZMAT5Q9UDW3 170 aaKnown RBP7.77□□□□□ -1.17
TDP1-211ENST00000555178 TRBV24-1A0A075B6N3 115 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 DEFB4AO15263 64 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 CAMPP49913 170 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 ZNF705AQ6ZN79 300 aaPredicted RBP7.76□□□□□ -1.17
TDP1-211ENST00000555178 BTF3L4Q96K17 158 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 KCNS1Q96KK3 526 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 C1QTNF4Q9BXJ3 329 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 GSN-AS1Q9NRJ2 163 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 X6R8D5 127 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 FAM231BA6NCW3 169 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 APOC4P55056 127 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 C11orf72Q8NBR9 251 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms