RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 LEPP41159 167 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 CMC4P56277 68 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 Q6AWC8 147 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 Q8N1Y9 231 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 RPP21Q9H633 154 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 IL36BQ9NZH7 164 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 URGCP-MRPS24S4R325 110 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 IGKV3D-20A0A0C4DH25 116 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 SMIM27A0A1W2PRY6 76 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 C7orf71A4D174 169 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 FABP5P3A8MUU1 101 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 ZNF324O75467 553 aaPredicted RBP5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 GPX1P07203 203 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 CXCL1P09341 107 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 GZMBP10144 247 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 RNASE4P34096 147 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 CDKN1BP46527 198 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 TCL1AP56279 114 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 KRTAP10-11P60412 298 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 ELOBQ15370 118 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 CT83Q5H943 113 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 GFI1BQ5VTD9 330 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 STHQ8IWL8 128 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 DEFB125Q8N687 156 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 OR2D3Q8NGH3 330 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 TUBA4BQ9H853 241 aa5.93□□□□□ -1.46
DEPDC4-207ENST00000549249 TMSB15BA0A087X1C1 80 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 TGIF2-C20orf24A0A0A6YYL0 155 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 TRAV12-3A0A0B4J271 114 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 TRAV21A0A0B4J279 112 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 TMEM189A5PLL7 270 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 CXorf65A6NEN9 183 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 COLCA2A8K830 154 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 G3V4G9 280 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 GIG44P09565 113 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 TSPOP30536 169 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 FAM3BP58499 235 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 EGFEM1PQ0D2K5 195 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 GTSCR1Q86UQ5 136 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 TSKUQ8WUA8 353 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 GTSF1Q8WW33 167 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 IMMP2LQ96T52 175 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 NEU1Q99519 415 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 PYGO2Q9BRQ0 406 aa5.92□□□□□ -1.46
DEPDC4-207ENST00000549249 MUC4Q99102 2169 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 PKD1L1Q8TDX9 2849 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 A0A1W2PPQ1 181 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 A8MWL6 223 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 ORM1P02763 201 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 RPL35AP18077 110 aaKnown RBP5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 ANXA2RQ3ZCQ2 193 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 MUC21Q5SSG8 566 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 SRD5A3Q9H8P0 318 aa5.91□□□□□ -1.46
DEPDC4-207ENST00000549249 DNAH3Q8TD57 4116 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 TRBV24-1A0A075B6N3 115 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 HIGD1CA8MV81 97 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 FRMD6-AS1P0C7T7 363 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 IGLC6P0CF74 106 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 S100PP25815 95 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 RPS20P60866 119 aaKnown RBP5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 C1orf158Q8N1D5 194 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 NUP35Q8NFH5 326 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 XCL2Q9UBD3 114 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 NAGKQ9UJ70 344 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 TP53TG3Q9ULZ0 132 aa5.9□□□□□ -1.46
DEPDC4-207ENST00000549249 VWFP04275 2813 aa5.9□□□□□ -1.47
DEPDC4-207ENST00000549249 NOTCH1P46531 2555 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 TRAV9-1A0A075B6T8 112 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 FAM231BA6NCW3 169 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 GNRH2O43555 120 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 SPINK4O60575 86 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 INSP01308 110 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 AMBPP02760 352 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 TYMSP04818 313 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 CTRLP40313 264 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 KCNIP4Q6PIL6 250 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 PGLYRP4Q96LB8 373 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
DEPDC4-207ENST00000549249 IGHV1OR15-1A0A075B7D0 117 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 MUC21A0A0G2JKD1 596 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 MUC21A0A140T8X8 626 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 A0A1B0GXF2 115 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 XKRY2A2RUG3 117 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 SNAI2O43623 268 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 PRM2P04554 102 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 ARMS2P0C7Q2 107 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 RNASE3P12724 160 aaKnown RBP5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 RAB5AP20339 215 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 TDRG1Q3Y452 100 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 DNLZQ5SXM8 178 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 MRPL54Q6P161 138 aaKnown RBP5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 MORN3Q6PF18 240 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms