RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 MCRIP1C9JLW8 97 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 H7BYZ3 331 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 S100A11P31949 105 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 IDO2Q6ZQW0 420 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 TEX29Q8N6K0 151 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 ABCA1O95477 2261 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 HERC1Q15751 4861 aa-0.56□□□□□ -2.5
SMARCA5-203ENST00000515531 UNC13BO14795 1591 aa-0.57□□□□□ -2.5
SMARCA5-203ENST00000515531 MRPS15P82914 257 aaKnown RBP-0.57□□□□□ -2.5
SMARCA5-203ENST00000515531 COX6A2Q02221 97 aa-0.57□□□□□ -2.5
SMARCA5-203ENST00000515531 KRTAP19-7Q3SYF9 63 aa-0.57□□□□□ -2.5
SMARCA5-203ENST00000515531 BLMP54132 1417 aaPredicted RBP-0.57□□□□□ -2.5
SMARCA5-203ENST00000515531 SRRM2Q9UQ35 2752 aaKnown RBP-0.57□□□□□ -2.5
SMARCA5-203ENST00000515531 HERC2O95714 4834 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 TRAV13-1A0A0B4J241 112 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 SERPINB1P30740 379 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 SRP9P49458 86 aaKnown RBP-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 DCUN1D2Q6PH85 259 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 MORN4Q8NDC4 146 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 OR51A4Q8NGJ6 313 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 TANC2Q9HCD6 1990 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 ZANQ9Y493 2812 aa-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 NUP210Q8TEM1 1887 aaPredicted RBP-0.58□□□□□ -2.5
SMARCA5-203ENST00000515531 SLC25A4P12235 298 aa-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 SDC4P31431 198 aa-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 LSM3P62310 102 aaKnown RBP-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 BASP1P80723 227 aaKnown RBP-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 KRTAP20-2Q3LI61 65 aa-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 UNQ5815/PRO19632Q6UWF5 114 aa-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 LXNQ9BS40 222 aa-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 KMT2AQ03164 3969 aa-0.59□□□□□ -2.5
SMARCA5-203ENST00000515531 MED13LQ71F56 2210 aa-0.6□□□□□ -2.5
SMARCA5-203ENST00000515531 DLEC1Q9Y238 1755 aa-0.6□□□□□ -2.5
SMARCA5-203ENST00000515531 LAMC3Q9Y6N6 1575 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 FAM135BQ49AJ0 1406 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 NEBP20929 6669 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 F2Z2F3 143 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 CCKP06307 115 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 BLCAPP62952 87 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 C3orf33Q6P1S2 294 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 CPDO75976 1380 aa-0.6□□□□□ -2.51
SMARCA5-203ENST00000515531 MYH3P11055 1940 aa-0.61□□□□□ -2.51
SMARCA5-203ENST00000515531 H3BMG7 143 aa-0.61□□□□□ -2.51
SMARCA5-203ENST00000515531 PFDN1O60925 122 aa-0.61□□□□□ -2.51
SMARCA5-203ENST00000515531 PTPN13Q12923 2485 aa-0.61□□□□□ -2.51
SMARCA5-203ENST00000515531 TNS1Q9HBL0 1735 aaKnown RBP-0.61□□□□□ -2.51
SMARCA5-203ENST00000515531 SYNMO15061 1565 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 SPAG17Q6Q759 2223 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 MAP1LC3B2A6NCE7 125 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 C9JAW5 83 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 PPP5D1E7EU14 171 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 IFITM1P13164 125 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 CRYGSP22914 178 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 OR5A2Q8NGI9 324 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 HOPXQ9BPY8 73 aaPredicted RBP-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 CCDC32Q9BV29 185 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 COA4Q9NYJ1 87 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 LAMA5O15230 3695 aa-0.62□□□□□ -2.51
SMARCA5-203ENST00000515531 SOGA1O94964 1423 aa-0.63□□□□□ -2.51
SMARCA5-203ENST00000515531 PPP1R1CQ8WVI7 109 aa-0.63□□□□□ -2.51
SMARCA5-203ENST00000515531 CADP27708 2225 aa-0.63□□□□□ -2.51
SMARCA5-203ENST00000515531 FAM208BQ5VWN6 2430 aa-0.63□□□□□ -2.51
SMARCA5-203ENST00000515531 PKD1L1Q8TDX9 2849 aa-0.63□□□□□ -2.51
SMARCA5-203ENST00000515531 HSPG2P98160 4391 aa-0.63□□□□□ -2.51
SMARCA5-203ENST00000515531 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 TRBV7-6A0A0J9YX20 115 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 CKS2P33552 79 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 STX12Q86Y82 276 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 BOLA2Q9H3K6 86 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 GID8Q9NWU2 228 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 ZNF292O60281 2723 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 FAT1Q14517 4588 aa-0.64□□□□□ -2.51
SMARCA5-203ENST00000515531 RYR3Q15413 4870 aa-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 USH2AO75445 5202 aa-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 HYDINQ4G0P3 5121 aa-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 IGHV1-24A0A0C4DH33 117 aa-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 ADCYAP1P18509 176 aa-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 POLR2JP52435 117 aaKnown RBP-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 TMEM141Q96I45 108 aa-0.65□□□□□ -2.51
SMARCA5-203ENST00000515531 MYH1P12882 1939 aa-0.66□□□□□ -2.51
SMARCA5-203ENST00000515531 DCHS2Q6V1P9 2916 aa-0.66□□□□□ -2.51
SMARCA5-203ENST00000515531 F5P12259 2224 aa-0.66□□□□□ -2.51
SMARCA5-203ENST00000515531 TRBV10-1A0A0K0K1A3 114 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 TEX49A0A1B0GTD5 131 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 FAM107AO95990 144 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 IFNA21P01568 189 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 APOC1P02654 83 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 TRIQKQ629K1 86 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 HRCT1Q6UXD1 115 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 MED31Q9Y3C7 131 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 DOPEY2Q9Y3R5 2298 aa-0.66□□□□□ -2.52
SMARCA5-203ENST00000515531 MYCBP2O75592 4640 aa-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 TRAV12-2A0A075B6T6 113 aa-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 PGRMC1O00264 195 aaKnown RBP-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 HBDP02042 147 aa-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 PYYP10082 97 aa-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 CRYBA4P53673 196 aa-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 TMEM78Q5T7P6 136 aa-0.67□□□□□ -2.52
SMARCA5-203ENST00000515531 OTOSQ8NHW6 89 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms