RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
SMARCA5-203ENST00000515531 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
SMARCA5-203ENST00000515531 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
SMARCA5-203ENST00000515531 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
SMARCA5-203ENST00000515531 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
SMARCA5-203ENST00000515531 FOXD1Q16676 465 aa20.54■□□□□ 0.88
SMARCA5-203ENST00000515531 ADRA2BP18089 450 aa19.7■□□□□ 0.74
SMARCA5-203ENST00000515531 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
SMARCA5-203ENST00000515531 MSH5O43196 834 aa19.56■□□□□ 0.72
SMARCA5-203ENST00000515531 PIAS4Q8N2W9 510 aaPredicted RBP19.35■□□□□ 0.69
SMARCA5-203ENST00000515531 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
SMARCA5-203ENST00000515531 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
SMARCA5-203ENST00000515531 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
SMARCA5-203ENST00000515531 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
SMARCA5-203ENST00000515531 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
SMARCA5-203ENST00000515531 KCNA4P22459 653 aa17.81■□□□□ 0.44
SMARCA5-203ENST00000515531 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
SMARCA5-203ENST00000515531 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
SMARCA5-203ENST00000515531 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
SMARCA5-203ENST00000515531 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
SMARCA5-203ENST00000515531 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
SMARCA5-203ENST00000515531 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
SMARCA5-203ENST00000515531 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
SMARCA5-203ENST00000515531 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
SMARCA5-203ENST00000515531 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
SMARCA5-203ENST00000515531 EHMT2Q96KQ7 1210 aa16.58■□□□□ 0.24
SMARCA5-203ENST00000515531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.243e-7■■□□□ 13.1
SMARCA5-203ENST00000515531 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
SMARCA5-203ENST00000515531 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
SMARCA5-203ENST00000515531 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
SMARCA5-203ENST00000515531 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
SMARCA5-203ENST00000515531 ZBTB22O15209 634 aa16.35■□□□□ 0.21
SMARCA5-203ENST00000515531 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
SMARCA5-203ENST00000515531 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
SMARCA5-203ENST00000515531 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
SMARCA5-203ENST00000515531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
SMARCA5-203ENST00000515531 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
SMARCA5-203ENST00000515531 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
SMARCA5-203ENST00000515531 APLP2Q06481 763 aa15.92■□□□□ 0.14
SMARCA5-203ENST00000515531 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
SMARCA5-203ENST00000515531 CAPN15O75808 1086 aa15.73■□□□□ 0.11
SMARCA5-203ENST00000515531 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
SMARCA5-203ENST00000515531 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
SMARCA5-203ENST00000515531 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
SMARCA5-203ENST00000515531 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
SMARCA5-203ENST00000515531 ABCB7O75027 752 aa15.4■□□□□ 0.06
SMARCA5-203ENST00000515531 POLA2Q14181 598 aa15.4■□□□□ 0.06
SMARCA5-203ENST00000515531 DSG3P32926 999 aa15.39■□□□□ 0.05
SMARCA5-203ENST00000515531 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
SMARCA5-203ENST00000515531 FBLN2P98095 1184 aa15.14■□□□□ 0.01
SMARCA5-203ENST00000515531 POTEHQ6S545 545 aa15.08■□□□□ 0
SMARCA5-203ENST00000515531 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
SMARCA5-203ENST00000515531 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
SMARCA5-203ENST00000515531 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
SMARCA5-203ENST00000515531 FKBP8Q14318 412 aa14.8□□□□□ -0.04
SMARCA5-203ENST00000515531 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
SMARCA5-203ENST00000515531 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
SMARCA5-203ENST00000515531 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
SMARCA5-203ENST00000515531 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
SMARCA5-203ENST00000515531 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
SMARCA5-203ENST00000515531 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
SMARCA5-203ENST00000515531 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
SMARCA5-203ENST00000515531 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
SMARCA5-203ENST00000515531 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
SMARCA5-203ENST00000515531 PROM2Q8N271 834 aa14.43□□□□□ -0.1
SMARCA5-203ENST00000515531 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
SMARCA5-203ENST00000515531 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
SMARCA5-203ENST00000515531 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
SMARCA5-203ENST00000515531 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
SMARCA5-203ENST00000515531 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
SMARCA5-203ENST00000515531 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
SMARCA5-203ENST00000515531 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
SMARCA5-203ENST00000515531 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
SMARCA5-203ENST00000515531 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-203ENST00000515531 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
SMARCA5-203ENST00000515531 MIER1Q8N108 512 aa14.04□□□□□ -0.16
SMARCA5-203ENST00000515531 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
SMARCA5-203ENST00000515531 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
SMARCA5-203ENST00000515531 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMARCA5-203ENST00000515531 HAX1O00165 279 aa13.96□□□□□ -0.17
SMARCA5-203ENST00000515531 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
SMARCA5-203ENST00000515531 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
SMARCA5-203ENST00000515531 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
SMARCA5-203ENST00000515531 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
SMARCA5-203ENST00000515531 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
SMARCA5-203ENST00000515531 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
SMARCA5-203ENST00000515531 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMARCA5-203ENST00000515531 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
SMARCA5-203ENST00000515531 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
SMARCA5-203ENST00000515531 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
SMARCA5-203ENST00000515531 NUBP1P53384 320 aa13.59□□□□□ -0.23
SMARCA5-203ENST00000515531 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
SMARCA5-203ENST00000515531 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
SMARCA5-203ENST00000515531 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
SMARCA5-203ENST00000515531 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
SMARCA5-203ENST00000515531 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
SMARCA5-203ENST00000515531 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
SMARCA5-203ENST00000515531 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
SMARCA5-203ENST00000515531 GSE1Q14687 1217 aa13.52□□□□□ -0.25
SMARCA5-203ENST00000515531 EVX2Q03828 476 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms