RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 DUX3Q96PT4 197 aa5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 PRADC1Q9BSG0 188 aa5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 SPANXDQ9BXN6 97 aa5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 TMEM160Q9NX00 188 aa5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 NHP2Q9NX24 153 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 TNCP24821 2201 aa5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 MED13LQ71F56 2210 aa5.64□□□□□ -1.51
SMARCE1-211ENST00000493660 TCRBV4S1A1TA0A5B7 111 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 NCBP2LA6PVI3 153 aaKnown RBP5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 TEX22C9J3V5 150 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 PRSS46E5RG02 174 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 C8orf88P0DMB2 117 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 MFAP2P55001 183 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 KRTAP1-1Q07627 177 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 C10orf55Q5SWW7 151 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 GDF5OSQ5U4N7 250 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 TMEM219Q86XT9 240 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 C5orf56Q8N8D9 126 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 DLX4Q92988 240 aaPredicted RBP5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 RNASE7Q9H1E1 156 aaKnown RBP5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 TACC2O95359 2948 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 E7EUB6 86 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 K7ERJ3 54 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 CSN1S1P47710 185 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 SMCPP49901 116 aaPredicted RBP5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 WT1-ASQ06250 92 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 FXYD3Q14802 87 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 FAM231DQ6ZW35 169 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 ZNF747Q9BV97 191 aa5.63□□□□□ -1.51
SMARCE1-211ENST00000493660 POLQO75417 2590 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 A0A1B0GXF2 115 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 A8MWL6 223 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 H3BUX3 64 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 MPDU1O75352 247 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 ARL14EPLP0DKL9 152 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 HLA-DRB4P13762 266 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 CRIP2P52943 208 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 DEFB112Q30KQ8 113 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 TREML4Q6UXN2 200 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 CHAC1Q9BUX1 264 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 F11RQ9Y624 299 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 HLA-DRB4X5D2U9 266 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 CENPEQ02224 2701 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 NBPF19A0A087WUL8 3843 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 IGHV7-81A0A0B4J1V7 117 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 LOC107984640A0A0U1RRK4 108 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 GCHFRP30047 84 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 SEC61GP60059 68 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 C12orf74Q32Q52 190 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 LYRM7Q5U5X0 104 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 AMTNQ6UX39 209 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 Q6YL49 198 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 SBSPONQ8IVN8 264 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 SSMEM1Q8WWF3 244 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 ZNF580Q9UK33 172 aa5.62□□□□□ -1.51
SMARCE1-211ENST00000493660 TRAV4A0A0B4J268 109 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 CRLF1O75462 422 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 NDUFA7O95182 113 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 CD69Q07108 199 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 KLK9Q2XQG4 91 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 RBPMS2Q6ZRY4 209 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 KLK9Q9UKQ9 250 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 WDR83OSQ9Y284 106 aa5.61□□□□□ -1.51
SMARCE1-211ENST00000493660 NPIPB6E9PJ23 425 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 CRYGDP07320 174 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 NDPQ00604 133 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 OR1L4Q8NGR5 311 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 BAALCQ8WXS3 180 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 MCRIP2Q9BUT9 160 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 AP5S1Q9NUS5 200 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 C21orf62Q9NYP8 219 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 PLXNB1O43157 2135 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 DUSP14O95147 198 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 EGR2P11161 476 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 HBBP68871 147 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 FAM110DQ8TAY7 271 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 ABCA1O95477 2261 aa5.6□□□□□ -1.51
SMARCE1-211ENST00000493660 ITPR3Q14573 2671 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 RS1O15537 224 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 NCR2O95944 276 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 IGLV2-8P01709 118 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 IGHV4-59P01825 116 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 IGHG2P01859 326 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 NMUP48645 174 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 LY6EQ16553 131 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 ASPHD1Q5U4P2 390 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 PCP2Q8IVA1 136 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 TMEM116Q8NCL8 245 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 IGF2BP2-AS1Q96M15 143 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 LSM4Q9Y4Z0 139 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 CREBBPQ92793 2442 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 A8MWV9 139 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 ATP6V0E1O15342 81 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 IGF1P05019 195 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 IGLC6P0CF74 106 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 C19orf54Q5BKX5 351 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 THAP8Q8NA92 274 aa5.59□□□□□ -1.51
SMARCE1-211ENST00000493660 TMUB1Q9BVT8 246 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms