RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 OR4C12Q96R67 309 aa4.46□□□□□ -1.7
CNOT9-207ENST00000489687 MCRIP2Q9BUT9 160 aaKnown RBP4.46□□□□□ -1.7
CNOT9-207ENST00000489687 HINT2Q9BX68 163 aa4.46□□□□□ -1.7
CNOT9-207ENST00000489687 TM2D2Q9BX73 214 aa4.46□□□□□ -1.7
CNOT9-207ENST00000489687 VSIRQ9H7M9 311 aa4.46□□□□□ -1.7
CNOT9-207ENST00000489687 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.46□□□□□ -1.7
CNOT9-207ENST00000489687 IGKV1D-8A0A087WSZ0 117 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 A0A1B0GWB2 263 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 FABP5P3A8MUU1 101 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 F2Z2F3 143 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 F8WDY8 70 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 M0R2Z0 102 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 RRHO14718 337 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 PPYP01298 95 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 IGF1P05019 195 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 NHLRC4P0CG21 123 aaPredicted RBP4.45□□□□□ -1.7
CNOT9-207ENST00000489687 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 PPIFP30405 207 aaKnown RBP4.45□□□□□ -1.7
CNOT9-207ENST00000489687 SRIP30626 198 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 OPRK1P41145 380 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 HERV-K104P61576 105 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 KIR2DS1Q14954 304 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 TNXAQ16473 311 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 TMEM30BQ3MIR4 351 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 Q56UQ5 140 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 C19orf54Q5BKX5 351 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 CT83Q5H943 113 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 C9orf66Q5T8R8 295 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 SPATA31B1PQ5VZV4 182 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 Q6AWC8 147 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 LCN12Q6JVE5 192 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 SBSPONQ8IVN8 264 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 ZNF491Q8N8L2 437 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 RAB9BQ9NP90 201 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 SS18L2Q9UHA2 77 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 FOXA2Q9Y261 457 aaPredicted RBP4.45□□□□□ -1.7
CNOT9-207ENST00000489687 YTHDF2Q9Y5A9 579 aaKnown RBP4.45□□□□□ -1.7
CNOT9-207ENST00000489687 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CNOT9-207ENST00000489687 A0A1B0GXF2 115 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 FBLL1A6NHQ2 334 aaKnown RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 PAX4O43316 350 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 NDUFA3O95167 84 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 NDUFB4O95168 129 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 CXorf1O96002 111 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 EGR2P11161 476 aaPredicted RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 G6PCP35575 357 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 PSG5Q15238 335 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 LGALS9BQ3B8N2 356 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 SP6Q3SY56 376 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 LGALS9CQ6DKI2 356 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 GATD1Q8NB37 220 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 NPBQ8NG41 125 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 DLX4Q92988 240 aaPredicted RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 MAP1LC3CQ9BXW4 147 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 MAP1LC3AQ9H492 121 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 ZNF331Q9NQX6 463 aaPredicted RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 TECRQ9NZ01 308 aaKnown RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 ZNF256Q9Y2P7 627 aaPredicted RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 LSM4Q9Y4Z0 139 aaKnown RBP4.44□□□□□ -1.7
CNOT9-207ENST00000489687 U3KQK5 164 aa4.44□□□□□ -1.7
CNOT9-207ENST00000489687 LOC102724200A0A096LPH7 203 aaPredicted RBP4.43□□□□□ -1.7
CNOT9-207ENST00000489687 IGHV1-24A0A0C4DH33 117 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 A4D1N5 150 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 FNDC10F2Z333 226 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 OVOL1O14753 267 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 PROP1O75360 226 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 LEPROTL1O95214 131 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 TRBV12-3P01733 135 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 TRGV3P03979 118 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 LGALS1P09382 135 aaKnown RBP4.43□□□□□ -1.7
CNOT9-207ENST00000489687 SLC38A11Q08AI6 406 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 ARL16Q0P5N6 197 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 GAGE13Q4V321 117 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 C10orf55Q5SWW7 151 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 TBC1D26Q86UD7 250 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 SYT8Q8NBV8 401 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 ZNF114Q8NC26 417 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 UBE2E2Q96LR5 201 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 WWC2-AS2Q96NR7 200 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 ZNF355PQ9NSJ1 428 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 PSENENQ9NZ42 101 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 WDR83OSQ9Y284 106 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 SELENOKQ9Y6D0 94 aa4.43□□□□□ -1.7
CNOT9-207ENST00000489687 A0A087X0K7 114 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 B5MCH6 92 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 K7EN84 100 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 IGLV2-23P01705 113 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 APOA2P02652 100 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 FRMD6-AS1P0C7T7 363 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 P0C879 139 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 MED14OSP0DP75 135 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 RPS16P62249 146 aaKnown RBP4.42□□□□□ -1.7
CNOT9-207ENST00000489687 FXYD3Q14802 87 aa4.42□□□□□ -1.7
CNOT9-207ENST00000489687 MLANAQ16655 118 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms