RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 RNF212Q495C1 297 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 Q6ZWC4 215 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 OR2D3Q8NGH3 330 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 KCNS1Q96KK3 526 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 LINC01587Q99440 93 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 LINC00467Q9BRT7 94 aa12.89□□□□□ -0.35
SMARCD3-212ENST00000485610 IGHV3OR16-12A0A075B7B8 117 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 ANXA2RQ3ZCQ2 193 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 CT83Q5H943 113 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 MRAPQ8TCY5 172 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 ANAPC16Q96DE5 110 aa12.88□□□□□ -0.35
SMARCD3-212ENST00000485610 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
SMARCD3-212ENST00000485610 RCHY1Q96PM5 261 aa12.87□□□□□ -0.35
SMARCD3-212ENST00000485610 V9GYV3 84 aa12.87□□□□□ -0.35
SMARCD3-212ENST00000485610 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
SMARCD3-212ENST00000485610 C7orf77A4D0Y5 90 aa12.86□□□□□ -0.35
SMARCD3-212ENST00000485610 CXCL1P09341 107 aa12.86□□□□□ -0.35
SMARCD3-212ENST00000485610 TRGV11A0A075B6L2 103 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 TMSB15BA0A087X1C1 80 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 CBY3A6NI87 242 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 RNF183Q96D59 192 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 A0A087WWC5 75 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 A8MWL6 223 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 TYMSP04818 313 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 CTDSP1Q9GZU7 261 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 RPS10P5Q9NQ39 176 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 TP53TG1Q9Y2A0 90 aa12.85□□□□□ -0.35
SMARCD3-212ENST00000485610 SPRY2O43597 315 aa12.84□□□□□ -0.35
SMARCD3-212ENST00000485610 HTN1P15515 57 aa12.84□□□□□ -0.35
SMARCD3-212ENST00000485610 NEU1Q99519 415 aa12.84□□□□□ -0.35
SMARCD3-212ENST00000485610 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
SMARCD3-212ENST00000485610 NBEAL2Q6ZNJ1 2754 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 SMIM9A6NGZ8 99 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 ASIPP42127 132 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 DEFA6Q01524 100 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 RRN3P1Q2M238 152 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 TSKUQ8WUA8 353 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 X6R8D5 127 aa12.83□□□□□ -0.36
SMARCD3-212ENST00000485610 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 GNRH2O43555 120 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 GZMBP10144 247 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 OR11H2Q8NH07 326 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 TMEM263Q8WUH6 116 aaKnown RBP12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 MUC4Q99102 2169 aa12.82□□□□□ -0.36
SMARCD3-212ENST00000485610 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 S100A4P26447 101 aaKnown RBP12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 ZNF415Q09FC8 603 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 ATRAIDQ6UW56 229 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 ZNF575Q86XF7 245 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 OVOL2Q9BRP0 275 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
SMARCD3-212ENST00000485610 FAM231BA6NCW3 169 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 H3BVH4 76 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 PRM2P04554 102 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 MED14OSP0DP75 135 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 ZNF493Q6ZR52 646 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 TM2D3Q9BRN9 247 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 RETNQ9HD89 108 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 IL36BQ9NZH7 164 aa12.8□□□□□ -0.36
SMARCD3-212ENST00000485610 A0A1W2PPQ1 181 aa12.79□□□□□ -0.36
SMARCD3-212ENST00000485610 IGLC6P0CF74 106 aa12.79□□□□□ -0.36
SMARCD3-212ENST00000485610 AZU1P20160 251 aa12.79□□□□□ -0.36
SMARCD3-212ENST00000485610 FER1L6-AS1Q8NA97 138 aa12.79□□□□□ -0.36
SMARCD3-212ENST00000485610 C11orf72Q8NBR9 251 aa12.79□□□□□ -0.36
SMARCD3-212ENST00000485610 B9D2Q9BPU9 175 aa12.79□□□□□ -0.36
SMARCD3-212ENST00000485610 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 MIFP14174 115 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 TCL1AP56279 114 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 GTSF1Q8WW33 167 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 C9orf85Q96MD7 179 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 MDFICQ9P1T7 246 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 HIGD1CA8MV81 97 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 OR5AL1P0C617 328 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 ARMS2P0C7Q2 107 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 CTRLP40313 264 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 TPPP3Q9BW30 176 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 NAT8BQ9UHF3 227 aa12.78□□□□□ -0.36
SMARCD3-212ENST00000485610 SNAI2O43623 268 aa12.77□□□□□ -0.37
SMARCD3-212ENST00000485610 FOXA3P55318 350 aaPredicted RBP12.77□□□□□ -0.37
SMARCD3-212ENST00000485610 IL17DQ8TAD2 202 aa12.77□□□□□ -0.37
SMARCD3-212ENST00000485610 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
SMARCD3-212ENST00000485610 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.37
SMARCD3-212ENST00000485610 TENM3Q9P273 2699 aa12.76□□□□□ -0.37
SMARCD3-212ENST00000485610 IGHV4-28A0A0C4DH34 117 aa12.76□□□□□ -0.37
SMARCD3-212ENST00000485610 CXorf65A6NEN9 183 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms