RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 MUC12Q9UKN1 5478 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 SMG1Q96Q15 3661 aaKnown RBP0.36□□□□□ -2.35
CCDC58-204ENST00000479414 CEP290O15078 2479 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
CCDC58-204ENST00000479414 MRPS36P82909 103 aaKnown RBP0.36□□□□□ -2.35
CCDC58-204ENST00000479414 DCUN1D2Q6PH85 259 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 CROCCP2Q86T23 111 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 TPRP12270 2363 aaKnown RBP0.36□□□□□ -2.35
CCDC58-204ENST00000479414 LRRC7Q96NW7 1537 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 COL12A1Q99715 3063 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 PCNX1Q96RV3 2341 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 PTPRMP28827 1452 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 TGP01266 2768 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 FREM2Q5SZK8 3169 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 EP300Q09472 2414 aaPredicted RBP0.35□□□□□ -2.35
CCDC58-204ENST00000479414 CREBBPQ92793 2442 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 AKAP13Q12802 2813 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 MAPKBP1O60336 1514 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 ACACBO00763 2458 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 SPTAN1Q13813 2472 aaKnown RBP0.35□□□□□ -2.35
CCDC58-204ENST00000479414 RIMS1Q86UR5 1692 aaKnown RBP0.35□□□□□ -2.35
CCDC58-204ENST00000479414 C3orf85A0A1B0GTC6 90 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 MAP1LC3B2A6NCE7 125 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 CCL4P13236 92 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 CLEC2BQ92478 149 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 LPAR5Q9H1C0 372 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 FKBP11Q9NYL4 201 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 USH2AO75445 5202 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 KIAA1107Q9UPP5 1409 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 TRAPPC8Q9Y2L5 1435 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
CCDC58-204ENST00000479414 KIF21BO75037 1637 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 BIVM-ERCC5R4GMW8 1640 aa0.35□□□□□ -2.35
CCDC58-204ENST00000479414 SPENQ96T58 3664 aaKnown RBP0.34□□□□□ -2.35
CCDC58-204ENST00000479414 WIZO95785 1651 aa0.34□□□□□ -2.35
CCDC58-204ENST00000479414 DSPP15924 2871 aaKnown RBP0.34□□□□□ -2.35
CCDC58-204ENST00000479414 SYNMO15061 1565 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 SYNJ1O43426 1573 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 S100A11P31949 105 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 ATMQ13315 3056 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 KRTAP20-1Q3LI63 56 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 CSAG1Q6PB30 78 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 OR5H6Q8NGV6 325 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 UNC13AQ9UPW8 1703 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 AKAP9Q99996 3911 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 CUBNO60494 3623 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 MADDQ8WXG6 1647 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 DNAH14Q0VDD8 3507 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 WDFY3Q8IZQ1 3526 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 CEP295Q9C0D2 2601 aa0.34□□□□□ -2.36
CCDC58-204ENST00000479414 CFAP43Q8NDM7 1665 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 CHD7Q9P2D1 2997 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 ANK1P16157 1881 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 DMXL2Q8TDJ6 3036 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 CNOT1A5YKK6 2376 aaKnown RBP0.33□□□□□ -2.36
CCDC58-204ENST00000479414 DIP2BQ9P265 1576 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 NINQ8N4C6 2090 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 USP9YO00507 2555 aaPredicted RBP0.33□□□□□ -2.36
CCDC58-204ENST00000479414 STAB2Q8WWQ8 2551 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 PPP5D1E7EU14 171 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 LY6G6CO95867 125 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 IGHV3-30P01768 117 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 IGHV3-30-5P0DP03 117 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 TMEM78Q5T7P6 136 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 TRIQKQ629K1 86 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 HRCT1Q6UXD1 115 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 CASC2Q6XLA1 102 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 C5orf17Q8NAS9 161 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 OR4B1Q8NGF8 309 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 LAMTOR3Q9UHA4 124 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 FAT3Q8TDW7 4589 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 MGAQ8IWI9 3026 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 TLN2Q9Y4G6 2542 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 MYOM1P52179 1685 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 HECTD4Q9Y4D8 3996 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 COL7A1Q02388 2944 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 EHBP1L1Q8N3D4 1523 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 MYO15AQ9UKN7 3530 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 CHD1O14646 1710 aa0.33□□□□□ -2.36
CCDC58-204ENST00000479414 SMARCA2P51531 1590 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 RB1CC1Q8TDY2 1594 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 YTHDC2Q9H6S0 1430 aaKnown RBP0.32□□□□□ -2.36
CCDC58-204ENST00000479414 VIRMAQ69YN4 1812 aaKnown RBP0.32□□□□□ -2.36
CCDC58-204ENST00000479414 TRACP01848 142 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 QRFPP83859 136 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 STX12Q86Y82 276 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 C10orf111Q8N326 155 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 TEX29Q8N6K0 151 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 MCEEQ96PE7 176 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 NABP2Q9BQ15 211 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 TRIOO75962 3097 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 PTPRZ1P23471 2315 aaPredicted RBP0.32□□□□□ -2.36
CCDC58-204ENST00000479414 EFCAB6Q5THR3 1501 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 NRKQ7Z2Y5 1582 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 HIVEP3Q5T1R4 2406 aa0.32□□□□□ -2.36
CCDC58-204ENST00000479414 ANK2Q01484 3957 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 IGF2RP11717 2491 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 VPS13CQ709C8 3753 aa0.31□□□□□ -2.36
CCDC58-204ENST00000479414 TMEM131LA2VDJ0 1609 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms