RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 JOSD1Q15040 202 aaPredicted RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 FOXI2Q6ZQN5 318 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 LCNL1Q6ZST4 164 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 OR9G4Q8NGQ1 327 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 Q8TAT8 98 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 CHCHD1Q96BP2 118 aaKnown RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 KCNS1Q96KK3 526 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 ALKBH7Q9BT30 221 aaPredicted RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 TMEM191AQ9H0A3 160 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 TSSC4Q9Y5U2 329 aaPredicted RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 A8MTW9 85 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 KLLNB2CW77 178 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 SNAI2O43623 268 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 SPINK4O60575 86 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 ZNF80P51504 273 aaPredicted RBP5.01□□□□□ -1.61
LDB3-206ENST00000477489 ERCC8Q13216 396 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 GDF5OSQ5U4N7 250 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 GFI1BQ5VTD9 330 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 IGFL4Q6B9Z1 124 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 C10orf99Q6UWK7 81 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 LYZL1Q6UWQ5 148 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 SMIM15Q7Z3B0 74 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 ZFAND2AQ8N6M9 145 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 KLHL30-AS1Q8NEE0 82 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 OR11H1Q8NG94 326 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 OR10D4PQ8NGN7 298 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 C18orf32Q8TCD1 76 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 C20orf173Q96LM9 149 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 CLUHP3Q96NS8 147 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 MS4A6AQ9H2W1 248 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 ESM1Q9NQ30 184 aa5.01□□□□□ -1.61
LDB3-206ENST00000477489 TLN2Q9Y4G6 2542 aa5□□□□□ -1.61
LDB3-206ENST00000477489 IGKV3D-20A0A0C4DH25 116 aa5□□□□□ -1.61
LDB3-206ENST00000477489 A0A0J9YX75 114 aa5□□□□□ -1.61
LDB3-206ENST00000477489 GRIFINA4D1Z8 144 aa5□□□□□ -1.61
LDB3-206ENST00000477489 OR4C46A6NHA9 309 aa5□□□□□ -1.61
LDB3-206ENST00000477489 SERF1AO75920 110 aa5□□□□□ -1.61
LDB3-206ENST00000477489 ARMS2P0C7Q2 107 aa5□□□□□ -1.61
LDB3-206ENST00000477489 IQCJQ1A5X6 159 aa5□□□□□ -1.61
LDB3-206ENST00000477489 TDRG1Q3Y452 100 aa5□□□□□ -1.61
LDB3-206ENST00000477489 TCTEX1D4Q5JR98 221 aa5□□□□□ -1.61
LDB3-206ENST00000477489 FAM104BQ5XKR9 115 aa5□□□□□ -1.61
LDB3-206ENST00000477489 DEFB125Q8N687 156 aa5□□□□□ -1.61
LDB3-206ENST00000477489 OR2K2Q8NGT1 345 aa5□□□□□ -1.61
LDB3-206ENST00000477489 LINC01006Q8NI28 216 aa5□□□□□ -1.61
LDB3-206ENST00000477489 SPAG8Q99932 426 aaPredicted RBP5□□□□□ -1.61
LDB3-206ENST00000477489 SAMD10Q9BYL1 202 aa5□□□□□ -1.61
LDB3-206ENST00000477489 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
LDB3-206ENST00000477489 TP53TG3Q9ULZ0 132 aa5□□□□□ -1.61
LDB3-206ENST00000477489 U3KQK5 164 aa5□□□□□ -1.61
LDB3-206ENST00000477489 VPS13CQ709C8 3753 aa5□□□□□ -1.61
LDB3-206ENST00000477489 HIVEP2P31629 2446 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 CUBNO60494 3623 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 ZNF324O75467 553 aaPredicted RBP4.99□□□□□ -1.61
LDB3-206ENST00000477489 HSBP1O75506 76 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 CSN3P07498 182 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 FRMD6-AS1P0C7T7 363 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 GZMBP10144 247 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 ASIPP42127 132 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 TWIST1Q15672 202 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 PYY3Q5JQD4 70 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 ORMDL3Q8N138 153 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 TMEM256Q8N2U0 113 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 DYNLRB2Q8TF09 96 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 FAM110AQ9BQ89 295 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 C20orf144Q9BQM9 153 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 SCRT2Q9NQ03 307 aa4.99□□□□□ -1.61
LDB3-206ENST00000477489 C7orf71A4D174 169 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 PRSS47A8MTI9 375 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 K7EMI3 77 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 CCL24O00175 119 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 TCF21O43680 179 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 NXPH4O95158 308 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 LY6G6DO95868 133 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 PPP1R17O96001 155 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 LINC00614P0C842 121 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 HLA-DRB4P13762 266 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 NTF3P20783 257 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 CDKN1BP46527 198 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 AMTP48728 403 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 SLURP1P55000 103 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 PROK1P58294 105 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 LINC00310P59036 64 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 PDZD11Q5EBL8 140 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 PSMG4Q5JS54 123 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 KHDC1LQ5JSQ8 128 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 PIK3CD-AS1Q5SR53 167 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 FAM159AQ6UWV7 190 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 ZNF575Q86XF7 245 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 NDUFA11Q86Y39 141 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 DUX5Q96PT3 197 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 TPPP3Q9BW30 176 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 NIT2Q9NQR4 276 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 HLA-DRB4X5D2U9 266 aa4.98□□□□□ -1.61
LDB3-206ENST00000477489 SONP18583 2426 aaKnown RBP4.98□□□□□ -1.61
LDB3-206ENST00000477489 TMSB15BA0A087X1C1 80 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 LINC01546A6NGU7 62 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 S100A4P26447 101 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms