RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZZEF1O43149 2961 aa0.09□□□□□ -2.39
CLK1-209ENST00000472679 CSPG4Q6UVK1 2322 aa0.09□□□□□ -2.39
CLK1-209ENST00000472679 ANK2Q01484 3957 aa0.09□□□□□ -2.39
CLK1-209ENST00000472679 A0A0J9YY99 117 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 GPR31O00270 319 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 MFSD11O43934 449 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 ATP5HO75947 161 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 PDE6GP18545 87 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 SPRR2EP22531 72 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 SPRR2BP35325 72 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 SPRR2AP35326 72 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 SPCS2Q15005 226 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 PRO3102Q9H379 93 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 APOBP04114 4563 aaKnown RBP0.09□□□□□ -2.4
CLK1-209ENST00000472679 ATMQ13315 3056 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 PRUNE2Q8WUY3 3088 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 GOLGB1Q14789 3259 aaKnown RBP0.09□□□□□ -2.4
CLK1-209ENST00000472679 DNAH9Q9NYC9 4486 aa0.09□□□□□ -2.4
CLK1-209ENST00000472679 FAT1Q14517 4588 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 DNAH5Q8TE73 4624 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 MALSU1Q96EH3 234 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 ABCA4P78363 2273 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 APC2O95996 2303 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 FAT2Q9NYQ8 4349 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 EHBP1L1Q8N3D4 1523 aa0.08□□□□□ -2.4
CLK1-209ENST00000472679 MUC17Q685J3 4493 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 BLMP54132 1417 aaPredicted RBP0.07□□□□□ -2.4
CLK1-209ENST00000472679 IFNA1P01562 189 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 PPP1R2P41236 205 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 ARF6P62330 175 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 QRFPP83859 136 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 FKBP1CQ5VVH2 108 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 OR13C6PQ8NH95 151 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 OR2H1Q9GZK4 316 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 SHANK2Q9UPX8 1470 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 ZMYM4Q5VZL5 1548 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 PKHD1L1Q86WI1 4243 aa0.07□□□□□ -2.4
CLK1-209ENST00000472679 ANK3Q12955 4377 aaKnown RBP0.06□□□□□ -2.4
CLK1-209ENST00000472679 PPRC1Q5VV67 1664 aaKnown RBP0.06□□□□□ -2.4
CLK1-209ENST00000472679 ARAP1Q96P48 1450 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 LCE6AA0A183 80 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 CST7O76096 145 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 RPL35P42766 123 aaKnown RBP0.06□□□□□ -2.4
CLK1-209ENST00000472679 NUP35Q8NFH5 326 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 CARD19Q96LW7 228 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 LYSTQ99698 3801 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 TAF9BQ9HBM6 251 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 MYH2Q9UKX2 1941 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 TRRAPQ9Y4A5 3859 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 DMDP11532 3685 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 CADP27708 2225 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 DNAH10Q8IVF4 4471 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 RTL9Q8NET4 1388 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 AKAP9Q99996 3911 aa0.06□□□□□ -2.4
CLK1-209ENST00000472679 TOP2BQ02880 1626 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 PTPRQQ9UMZ3 2332 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 MAGI2Q86UL8 1455 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 LTC4SQ16873 150 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 RTL8BQ17RB0 113 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 SMIM20Q8N5G0 67 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 RTL8AQ9BWD3 113 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 TNXBP22105 4242 aa0.05□□□□□ -2.4
CLK1-209ENST00000472679 FLGP20930 4061 aaPredicted RBP0.04□□□□□ -2.4
CLK1-209ENST00000472679 PTPRMP28827 1452 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 ERCC6Q03468 1493 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 RALGAPBQ86X10 1494 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 LY6G6CO95867 125 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 MT-ND6P03923 174 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 GNG3P63215 75 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 RPL19P84098 196 aaKnown RBP0.04□□□□□ -2.4
CLK1-209ENST00000472679 NEDD8Q15843 81 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 CASC2Q6XLA1 102 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 PRR15Q8IV56 129 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 C10orf111Q8N326 155 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 OR4C12Q96R67 309 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 NABP2Q9BQ15 211 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 OTORQ9NRC9 128 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 NAT8BQ9UHF3 227 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 TPRKBQ9Y3C4 175 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 LPAP08519 4548 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 NESP48681 1621 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 COL4A6Q14031 1691 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 DNAH6Q9C0G6 4158 aa0.04□□□□□ -2.4
CLK1-209ENST00000472679 LRRC7Q96NW7 1537 aa0.03□□□□□ -2.4
CLK1-209ENST00000472679 HUWE1Q7Z6Z7 4374 aaKnown RBP0.03□□□□□ -2.4
CLK1-209ENST00000472679 POU6F1Q14863 301 aa0.03□□□□□ -2.4
CLK1-209ENST00000472679 Q5VSD8 79 aa0.03□□□□□ -2.4
CLK1-209ENST00000472679 SPINK6Q6UWN8 80 aa0.03□□□□□ -2.4
CLK1-209ENST00000472679 EFCAB11Q9BUY7 163 aa0.03□□□□□ -2.4
CLK1-209ENST00000472679 PHLPP1O60346 1717 aa0.03□□□□□ -2.4
CLK1-209ENST00000472679 KIAA0586Q9BVV6 1533 aa0.03□□□□□ -2.41
CLK1-209ENST00000472679 DNAH3Q8TD57 4116 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 NWD1Q149M9 1564 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 BAZ1AQ9NRL2 1556 aaPredicted RBP0.02□□□□□ -2.41
CLK1-209ENST00000472679 CTTNBP2Q8WZ74 1663 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 BCORL1Q5H9F3 1711 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 VPS13BQ7Z7G8 4022 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 SPTBN1Q01082 2364 aaKnown RBP0.02□□□□□ -2.41
CLK1-209ENST00000472679 KRTAP20-2Q3LI61 65 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms