RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ACACBO00763 2458 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 ZCCHC24Q8N2G6 241 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 PIFOQ8TCI5 191 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 CFAP54Q96N23 3096 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 INS-IGF2F8WCM5 200 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 MORN5Q5VZ52 161 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 RASL10AQ92737 203 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 IGLV3-9A0A075B6K5 115 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 PRORYQ9H606 182 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 TEX49A0A1B0GTD5 131 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 THAP8Q8NA92 274 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 ASCL2Q99929 193 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 V9GYY9 64 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 ANKRD11Q6UB99 2663 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 C19orf71A6NCJ1 209 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 COX7A1P24310 79 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
SYNGAP1-203ENST00000428982 TIMM23O14925 209 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 LHBP01229 141 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 EXOC3-AS1Q8N2X6 119 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 KLK5Q9Y337 293 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 F8VRH5 84 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
SYNGAP1-203ENST00000428982 A0A1B0GX51 115 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 TEX36Q5VZQ5 186 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 DSCAML1Q8TD84 2053 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 IGKV1-16P04430 117 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 NDUFA11Q86Y39 141 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 PROP1O75360 226 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
SYNGAP1-203ENST00000428982 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
SYNGAP1-203ENST00000428982 CGB3P0DN86 165 aa11.3□□□□□ -0.6
SYNGAP1-203ENST00000428982 CGB7P0DN87 165 aa11.3□□□□□ -0.6
SYNGAP1-203ENST00000428982 CCL3L1P16619 93 aa11.3□□□□□ -0.6
SYNGAP1-203ENST00000428982 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 E7EQL1 145 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 IGHG4P01861 327 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 CCL19Q99731 98 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 HHLA3Q9XRX5 114 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 CFC1BP0CG36 223 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 CFC1P0CG37 223 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 RNF5Q99942 180 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 PTPRBP23467 1997 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 ATP5G1P05496 136 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 NCKAP5O14513 1909 aa11.29□□□□□ -0.6
SYNGAP1-203ENST00000428982 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 LINC01587Q99440 93 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 CACNA1AO00555 2505 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 TMEM200BQ69YZ2 307 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 A0A096LNJ9 63 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 hADV29S1A0JD25 119 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 DLX6P56179 175 aa11.28□□□□□ -0.6
SYNGAP1-203ENST00000428982 Q8N8P6 123 aa11.27□□□□□ -0.6
SYNGAP1-203ENST00000428982 ABCA1O95477 2261 aa11.27□□□□□ -0.6
SYNGAP1-203ENST00000428982 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 IGHV3-72A0A0B4J1Y9 119 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 ATOX1O00244 68 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 PAPPA-AS1Q5QFB9 102 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 SEC61GP60059 68 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 LINC00526Q96FQ7 95 aa11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 ANKHD1Q8IWZ3 2542 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-203ENST00000428982 TRBV10-2A0A0K0K1G8 114 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 LGALS9O00182 355 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 SRRM4A7MD48 611 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 EFNA4P52798 201 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 TRAV8-3A0A0A6YYJ7 113 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 UBE2D3P61077 147 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 UBE2D2P62837 147 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 TMEM14CQ9P0S9 112 aa11.26□□□□□ -0.61
SYNGAP1-203ENST00000428982 WI2-2373I1.2A0A1W2PRP0 233 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 ACYP1P07311 99 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 APELAP0DMC3 54 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 IGFBPL1Q8WX77 278 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 AKAP6Q13023 2319 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 PRR14LQ5THK1 2151 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 LINC01548A6NM66 108 aa11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-203ENST00000428982 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms