RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TMEM189A5PLL7 270 aa12.35□□□□□ -0.43
TSPAN4-205ENST00000397406 INSP01308 110 aa12.35□□□□□ -0.43
TSPAN4-205ENST00000397406 ORM1P02763 201 aa12.35□□□□□ -0.43
TSPAN4-205ENST00000397406 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
TSPAN4-205ENST00000397406 ANXA2RQ3ZCQ2 193 aa12.34□□□□□ -0.43
TSPAN4-205ENST00000397406 CBLN2Q8IUK8 224 aa12.34□□□□□ -0.43
TSPAN4-205ENST00000397406 CSTL1Q9H114 145 aa12.34□□□□□ -0.43
TSPAN4-205ENST00000397406 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
TSPAN4-205ENST00000397406 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
TSPAN4-205ENST00000397406 TMSB15BA0A087X1C1 80 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 A8MZ25 164 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 TMEM88Q6PEY1 159 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 NAGKQ9UJ70 344 aa12.33□□□□□ -0.44
TSPAN4-205ENST00000397406 KIR2DL5BA0A0G2JN68 375 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 KIR2DL5BA0A0G2JPC4 375 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 SMIM27A0A1W2PRY6 76 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 CXorf65A6NEN9 183 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 A8MWL6 223 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 GZMBP10144 247 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 TDRG1Q3Y452 100 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 KIR2DL5AQ8N109 375 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 C1orf158Q8N1D5 194 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 CSNK1G2-AS1Q8NCQ2 148 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 KIR2DL5BQ8NHK3 375 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 IMMP2LQ96T52 175 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 HUWE1Q7Z6Z7 4374 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-205ENST00000397406 CXCL1P09341 107 aa12.31□□□□□ -0.44
TSPAN4-205ENST00000397406 FAM159AQ6UWV7 190 aa12.31□□□□□ -0.44
TSPAN4-205ENST00000397406 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
TSPAN4-205ENST00000397406 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 XKRY2A2RUG3 117 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 GRIFINA4D1Z8 144 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 FAM231BA6NCW3 169 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 TCL1AP56279 114 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 KCNS1Q96KK3 526 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 YPEL4Q96NS1 127 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 NEU1Q99519 415 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
TSPAN4-205ENST00000397406 TYMSP04818 313 aa12.29□□□□□ -0.44
TSPAN4-205ENST00000397406 APOC4P55056 127 aa12.29□□□□□ -0.44
TSPAN4-205ENST00000397406 FAM3BP58499 235 aaPredicted RBP12.29□□□□□ -0.44
TSPAN4-205ENST00000397406 URGCP-MRPS24S4R325 110 aa12.29□□□□□ -0.44
TSPAN4-205ENST00000397406 GNRH2O43555 120 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 IGLC6P0CF74 106 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 FOXA3P55318 350 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 DNLZQ5SXM8 178 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 LINC01587Q99440 93 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 S100PP25815 95 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 ELOBQ15370 118 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 NUP35Q8NFH5 326 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 NAT8BQ9UHF3 227 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 GOLT1BQ9Y3E0 138 aa12.28□□□□□ -0.44
TSPAN4-205ENST00000397406 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.45
TSPAN4-205ENST00000397406 FER1L6-AS1Q8NA97 138 aa12.27□□□□□ -0.45
TSPAN4-205ENST00000397406 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.45
TSPAN4-205ENST00000397406 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 IGHV3OR16-12A0A075B7B8 117 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 UBE2CO00762 179 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 PRM2P04554 102 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 CTRLP40313 264 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 ASIPP42127 132 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
TSPAN4-205ENST00000397406 RYR3Q15413 4870 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 IGHV3-16A0A0C4DH30 117 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 CBY3A6NI87 242 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 H3BVH4 76 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 SNAI2O43623 268 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 LYZL1Q6UWQ5 148 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 MUC4Q99102 2169 aa12.25□□□□□ -0.45
TSPAN4-205ENST00000397406 TENM3Q9P273 2699 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 HTN1P15515 57 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 SCRT2Q9NQ03 307 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 MDFICQ9P1T7 246 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
TSPAN4-205ENST00000397406 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 AZU1P20160 251 aa12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 DEFB135Q30KP9 77 aa12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 C11orf72Q8NBR9 251 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms