RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SAA4P35542 130 aa5.09□□□□□ -1.6
CSDE1-203ENST00000358528 HERVK_113P61574 105 aa5.09□□□□□ -1.6
CSDE1-203ENST00000358528 FAM208BQ5VWN6 2430 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 IGHV7-81A0A0B4J1V7 117 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 TMEM238LA0A1B0GVL6 79 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 LINC01549A6NIU2 74 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 A6NJY4 79 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 LINC01548A6NM66 108 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 H7C1H1 209 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SIVA1O15304 175 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SLC25A16P16260 332 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 RAB9AP51151 201 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SRSF8Q9BRL6 282 aaKnown RBP5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SMPXQ9UHP9 88 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SMAD5-AS1Q9Y6J3 95 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 PTPN13Q12923 2485 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 IGKV3D-20A0A0C4DH25 116 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 IGLL5B9A064 214 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 PRSS2P07478 247 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 HLA-DRB4P13762 266 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 KLHL30-AS1Q8NEE0 82 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 HLA-DRB4X5D2U9 266 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SPTBN4Q9H254 2564 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 GAGE12HA6NDE8 117 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 IGF1P05019 195 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 PAX8Q06710 450 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 ZNF56Q15929 161 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 C2orf66Q6UXQ4 117 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 RNF185Q96GF1 192 aa5.08□□□□□ -1.6
CSDE1-203ENST00000358528 SMG1Q96Q15 3661 aaKnown RBP5.08□□□□□ -1.6
CSDE1-203ENST00000358528 FAM159AQ6UWV7 190 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 Q8NA96 180 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 PRADC1Q9BSG0 188 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 GNRH2O43555 120 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 BUB3O43684 328 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 IGLC6P0CF74 106 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 PLNP26678 52 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
CSDE1-203ENST00000358528 ORMDL2Q53FV1 153 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 A0A087WX48 190 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 TRAV21A0A0B4J279 112 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 TRBV6-1A0A0K0K1D8 114 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 A0A1B0GV72 72 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 NDUFS8O00217 210 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 CD7P09564 240 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 ANXA2RQ3ZCQ2 193 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 KIR2DL4Q99706 377 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 SMIM2Q9BVW6 85 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 C11orf21Q9P2W6 132 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 CACNA1AO00555 2505 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 F8VRH5 84 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 TNFRSF13BO14836 293 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-203ENST00000358528 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
CSDE1-203ENST00000358528 RAX2Q96IS3 184 aa5.07□□□□□ -1.6
CSDE1-203ENST00000358528 WNK1Q9H4A3 2382 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 SETD2Q9BYW2 2564 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-203ENST00000358528 ACACBO00763 2458 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 MYMXA0A1B0GTQ4 84 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 M0R1W7 72 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 MRPS12O15235 138 aaKnown RBP5.06□□□□□ -1.6
CSDE1-203ENST00000358528 ZFP36P26651 326 aaKnown RBP5.06□□□□□ -1.6
CSDE1-203ENST00000358528 UFSP1Q6NVU6 142 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 OR11H6Q8NGC7 330 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 MYO9AB2RTY4 2548 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 TRAV2A0A0B4J234 112 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 TRAV12-3A0A0B4J271 114 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 FOXI2Q6ZQN5 318 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 NPBQ8NG41 125 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 PTH2Q96A98 100 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 BPESC1Q9GZL8 116 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 DPH3P1Q9H4G8 78 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 U3KQK5 164 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 HIVEP3Q5T1R4 2406 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 TRAV41A0A0B4J266 112 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 HOXB4P17483 251 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-203ENST00000358528 CKS1BP61024 79 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 CLEC2AQ6UVW9 174 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 Q8N9W7 124 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 SYT8Q8NBV8 401 aa5.06□□□□□ -1.6
CSDE1-203ENST00000358528 FAM110DQ8TAY7 271 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-203ENST00000358528 ZZEF1O43149 2961 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 USP9YO00507 2555 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-203ENST00000358528 PRSS29PA6NIE9 313 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 LY6LH3BQJ8 138 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 NPC2P61916 151 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 LINC00477Q96M19 166 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 SPOCK3Q9BQ16 436 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 TP53TG1Q9Y2A0 90 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 IGHV3-73A0A0B4J1V6 119 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 INSL3P51460 131 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 LINC01559Q495D7 138 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 PSMG4Q5JS54 123 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 LYRM7Q5U5X0 104 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 C16orf54Q6UWD8 224 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 HHLA3Q9XRX5 114 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 F8W1H4 67 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 ZNF688P0C7X2 276 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 RRN3P1Q2M238 152 aa5.05□□□□□ -1.6
CSDE1-203ENST00000358528 DLX4Q92988 240 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms