RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 P01737 135 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 TCRAP04437 139 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 HBBP68871 147 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 EEF1AKMT3Q96AZ1 226 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 CTSGP08311 255 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 DEFB1P60022 68 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 LTAP01374 205 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
COL18A1-201ENST00000342220 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 RNF182Q8N6D2 247 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 RNF183Q96D59 192 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 PRSS22Q9GZN4 317 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
COL18A1-201ENST00000342220 A8MWL6 223 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 OR4X2Q8NGF9 303 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 FMC1Q96HJ9 113 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 A0A1B0GW15 77 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
COL18A1-201ENST00000342220 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 FAM110DQ8TAY7 271 aaPredicted RBP10.09□□□□□ -0.79
COL18A1-201ENST00000342220 MRPL16Q9NX20 251 aaKnown RBP10.09□□□□□ -0.79
COL18A1-201ENST00000342220 C19orf71A6NCJ1 209 aa10.09□□□□□ -0.79
COL18A1-201ENST00000342220 DAZAP1Q96EP5 407 aaKnown RBP10.09□□□□□ -0.79
COL18A1-201ENST00000342220 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 COX8AP10176 69 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 EBI3Q14213 229 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 WFDC2Q14508 124 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 SRSF8Q9BRL6 282 aaKnown RBP10.08□□□□□ -0.8
COL18A1-201ENST00000342220 MAP1LC3CQ9BXW4 147 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 TSPAN13O95857 204 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 Q8TAT8 98 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 GLMPQ8WWB7 406 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 TRBV7-9A0A0J9YWB2 115 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 UNQ9165/PRO28630Q6UXU0 137 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 SPAG8Q99932 426 aaPredicted RBP10.08□□□□□ -0.8
COL18A1-201ENST00000342220 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
COL18A1-201ENST00000342220 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
COL18A1-201ENST00000342220 IGHV1-24A0A0C4DH33 117 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
COL18A1-201ENST00000342220 MS4A6AQ9H2W1 248 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 A6NDX4 124 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 B5MCH6 92 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 EDN2P20800 178 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 Q86TA4 180 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 SMIM20Q8N5G0 67 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 AAMDCQ9H7C9 122 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
COL18A1-201ENST00000342220 ODF1Q14990 250 aa10.06□□□□□ -0.8
COL18A1-201ENST00000342220 ZNF138P52744 262 aa10.06□□□□□ -0.8
COL18A1-201ENST00000342220 RBPMS2Q6ZRY4 209 aaKnown RBP10.06□□□□□ -0.8
COL18A1-201ENST00000342220 BOD1L2Q8IYS8 172 aa10.06□□□□□ -0.8
COL18A1-201ENST00000342220 METTL26Q96S19 204 aa10.06□□□□□ -0.8
COL18A1-201ENST00000342220 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
COL18A1-201ENST00000342220 CT83Q5H943 113 aa10.06□□□□□ -0.8
COL18A1-201ENST00000342220 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 CRXO43186 299 aaPredicted RBP10.05□□□□□ -0.8
COL18A1-201ENST00000342220 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 CHEK1O14757 476 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 IGLV2-11P01706 119 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 INSL3P51460 131 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
COL18A1-201ENST00000342220 VPREB3Q9UKI3 123 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
COL18A1-201ENST00000342220 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
COL18A1-201ENST00000342220 CSN1S1P47710 185 aa10.04□□□□□ -0.8
COL18A1-201ENST00000342220 SYNJ2BPP57105 145 aa10.04□□□□□ -0.8
COL18A1-201ENST00000342220 C18orf65Q6ZTR6 163 aa10.04□□□□□ -0.8
COL18A1-201ENST00000342220 ZNF502Q8TBZ5 544 aa10.04□□□□□ -0.8
COL18A1-201ENST00000342220 A0A096LNT2 108 aa10.04□□□□□ -0.8
COL18A1-201ENST00000342220 MAST4O15021 2626 aa10.04□□□□□ -0.8
COL18A1-201ENST00000342220 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 SIVA1O15304 175 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 ZNF418Q8TF45 676 aaPredicted RBP10.03□□□□□ -0.8
COL18A1-201ENST00000342220 C16orf92Q96LL3 132 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 PDZD2O15018 2839 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 CSN3P07498 182 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 ERCC8Q13216 396 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 ANAPC13Q9BS18 74 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 BRI3O95415 125 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 IGHG2P01859 326 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 DPF1Q92782 380 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 VGLL1Q99990 258 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 TMEM14CQ9P0S9 112 aa10.03□□□□□ -0.8
COL18A1-201ENST00000342220 CHCHD1Q96BP2 118 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms