RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PSMG4Q5JS54 123 aa8.88□□□□□ -0.99
TRIM40-205ENST00000307859 HIST2H2BDQ6DRA6 164 aa8.88□□□□□ -0.99
TRIM40-205ENST00000307859 ZNF493Q6ZR52 646 aa8.88□□□□□ -0.99
TRIM40-205ENST00000307859 OR10D4PQ8NGN7 298 aa8.88□□□□□ -0.99
TRIM40-205ENST00000307859 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
TRIM40-205ENST00000307859 ALKBH7Q9BT30 221 aaPredicted RBP8.88□□□□□ -0.99
TRIM40-205ENST00000307859 TPPP3Q9BW30 176 aa8.88□□□□□ -0.99
TRIM40-205ENST00000307859 SORL1Q92673 2214 aa8.88□□□□□ -0.99
TRIM40-205ENST00000307859 WNK1Q9H4A3 2382 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 LOC102724200A0A096LPH7 203 aaPredicted RBP8.87□□□□□ -0.99
TRIM40-205ENST00000307859 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 KLLNB2CW77 178 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 CCL24O00175 119 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 NUPR1O60356 82 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 SERF1AO75920 110 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 C11orf44Q8N8P7 122 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 C18orf32Q8TCD1 76 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 TMEM18Q96B42 140 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
TRIM40-205ENST00000307859 C12orf57Q99622 126 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 RNF114Q9Y508 228 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 TGP01266 2768 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 A0A0J9YX75 114 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 Q6ZQT7 251 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 BAGE3Q86Y29 109 aa8.87□□□□□ -0.99
TRIM40-205ENST00000307859 A0A1W2PRX2 142 aa8.86□□□□□ -0.99
TRIM40-205ENST00000307859 GPX1P07203 203 aa8.86□□□□□ -0.99
TRIM40-205ENST00000307859 TMEM61Q8N0U2 210 aa8.86□□□□□ -0.99
TRIM40-205ENST00000307859 TCF21O43680 179 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 DEFB114Q30KQ6 69 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 PRR31Q5SQ13 230 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 FOXI2Q6ZQN5 318 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 DYNLRB2Q8TF09 96 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 RCHY1Q96PM5 261 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
TRIM40-205ENST00000307859 ADARB2-AS1A8MUL3 147 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 J3KRW8 73 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 SNAI2O43623 268 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
TRIM40-205ENST00000307859 OR5AL1P0C617 328 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 NTF3P20783 257 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 LEPP41159 167 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 DEFA6Q01524 100 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 KIR3DS1Q14943 382 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 EBLN2Q6P2I7 272 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 PKD1L1Q8TDX9 2849 aa8.84□□□□□ -0.99
TRIM40-205ENST00000307859 TRAV25A0A0B4J276 109 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 A8MTW9 85 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 CD33P20138 364 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
TRIM40-205ENST00000307859 IQCJQ1A5X6 159 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 DNLZQ5SXM8 178 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 DMRTA1Q5VZB9 504 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 FAM104BQ5XKR9 115 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 KCNS1Q96KK3 526 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 MUC21A0A140T8X8 626 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 MED14OSP0DP75 135 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 TWIST1Q15672 202 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 MUC21Q5SSG8 566 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.83□□□□□ -1
TRIM40-205ENST00000307859 SPAG8Q99932 426 aaPredicted RBP8.83□□□□□ -1
TRIM40-205ENST00000307859 TMEM191AQ9H0A3 160 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 NAGKQ9UJ70 344 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 NOTCH1P46531 2555 aa8.83□□□□□ -1
TRIM40-205ENST00000307859 MUC4Q99102 2169 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 C7orf71A4D174 169 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 CACNG7P62955 275 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 ANXA2RQ3ZCQ2 193 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 CD300EQ496F6 205 aaPredicted RBP8.82□□□□□ -1
TRIM40-205ENST00000307859 AMTNQ6UX39 209 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 C3orf56Q8N813 242 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 OR10AG1Q8NH19 301 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 MSRB1Q9NZV6 116 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 U3KQK5 164 aa8.82□□□□□ -1
TRIM40-205ENST00000307859 TSPOP30536 169 aa8.81□□□□□ -1
TRIM40-205ENST00000307859 DEFB131AP59861 70 aa8.81□□□□□ -1
TRIM40-205ENST00000307859 JOSD1Q15040 202 aaPredicted RBP8.81□□□□□ -1
TRIM40-205ENST00000307859 AMN1Q8IY45 258 aa8.81□□□□□ -1
TRIM40-205ENST00000307859 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
TRIM40-205ENST00000307859 MAP6D1Q9H9H5 199 aa8.81□□□□□ -1
TRIM40-205ENST00000307859 ZNF256Q9Y2P7 627 aaPredicted RBP8.81□□□□□ -1
TRIM40-205ENST00000307859 OR4C46A6NHA9 309 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 H3BVH4 76 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
TRIM40-205ENST00000307859 HLA-DRB4P13762 266 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 ASIPP42127 132 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 CDKN1BP46527 198 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 KRTAP10-3P60369 221 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 SSTP61278 116 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 NDUFA11Q86Y39 141 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 SAMD10Q9BYL1 202 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 SCRT2Q9NQ03 307 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 TDRG1Q3Y452 100 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
TRIM40-205ENST00000307859 RNF185Q96GF1 192 aa8.8□□□□□ -1
TRIM40-205ENST00000307859 TRAV12-3A0A0B4J271 114 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms