RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
TTC39B-201ENST00000297615 C7orf71A4D174 169 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 H3BVH4 76 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 PCP2Q8IVA1 136 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 SFTPCP11686 197 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 BVES-AS1Q5T3Y7 98 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 SPANXN1Q5VSR9 72 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 SCRT2Q9NQ03 307 aa10.36□□□□□ -0.75
TTC39B-201ENST00000297615 RNASE8Q8TDE3 154 aaKnown RBP10.35□□□□□ -0.75
TTC39B-201ENST00000297615 IFI27L1Q96BM0 104 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 ZFAND3Q9H8U3 227 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 MOB4Q9Y3A3 225 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 RNASE4P34096 147 aaKnown RBP10.35□□□□□ -0.75
TTC39B-201ENST00000297615 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
TTC39B-201ENST00000297615 HBDP02042 147 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 PRR9Q5T870 116 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 Q6AWC8 147 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
TTC39B-201ENST00000297615 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
TTC39B-201ENST00000297615 C1orf122Q6ZSJ8 110 aa10.34□□□□□ -0.75
TTC39B-201ENST00000297615 UBR5O95071 2799 aaPredicted RBP10.34□□□□□ -0.75
TTC39B-201ENST00000297615 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
TTC39B-201ENST00000297615 K7EP13 123 aa10.34□□□□□ -0.75
TTC39B-201ENST00000297615 NEGR1Q7Z3B1 354 aa10.34□□□□□ -0.75
TTC39B-201ENST00000297615 IGKV3D-20A0A0C4DH25 116 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 ZNF688P0C7X2 276 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 GAGE1Q13065 139 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
TTC39B-201ENST00000297615 S100A4P26447 101 aaKnown RBP10.33□□□□□ -0.76
TTC39B-201ENST00000297615 UBE2V1Q13404 147 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 EBI3Q14213 229 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
TTC39B-201ENST00000297615 FOXC2Q99958 501 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 SPOCK3Q9BQ16 436 aa10.33□□□□□ -0.76
TTC39B-201ENST00000297615 GNRH2O43555 120 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 A0A1W2PRX2 142 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 TAX1BP3O14907 124 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 GTSCR1Q86UQ5 136 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 TMEM158Q8WZ71 300 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
TTC39B-201ENST00000297615 MGPP08493 103 aa10.31□□□□□ -0.76
TTC39B-201ENST00000297615 C12orf54Q6X4T0 127 aa10.31□□□□□ -0.76
TTC39B-201ENST00000297615 ORAOV1Q8WV07 137 aa10.31□□□□□ -0.76
TTC39B-201ENST00000297615 SYNJ2BPP57105 145 aa10.31□□□□□ -0.76
TTC39B-201ENST00000297615 SRSF2Q01130 221 aaKnown RBP10.31□□□□□ -0.76
TTC39B-201ENST00000297615 AP1S3Q96PC3 154 aa10.31□□□□□ -0.76
TTC39B-201ENST00000297615 JPT2Q9H910 190 aa10.31□□□□□ -0.76
TTC39B-201ENST00000297615 TRAV8-6A0A0B4J262 113 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 A0A1B0GW15 77 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 TEP1Q99973 2627 aaKnown RBP10.3□□□□□ -0.76
TTC39B-201ENST00000297615 SETXQ7Z333 2677 aaKnown RBP10.3□□□□□ -0.76
TTC39B-201ENST00000297615 COX8AP10176 69 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 COX6B1P14854 86 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 FCER1GP30273 86 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 SRSF1Q07955 248 aaKnown RBP eCLIP10.3□□□□□ -0.76
TTC39B-201ENST00000297615 C2orf91Q6ZV80 131 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 OOSP1A8MZH6 123 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 IGLC6P0CF74 106 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
TTC39B-201ENST00000297615 H3BUT2 72 aa10.29□□□□□ -0.76
TTC39B-201ENST00000297615 GCSHP23434 173 aa10.29□□□□□ -0.76
TTC39B-201ENST00000297615 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
TTC39B-201ENST00000297615 C14orf178Q8N769 122 aaPredicted RBP10.29□□□□□ -0.76
TTC39B-201ENST00000297615 RAB9AP51151 201 aa10.29□□□□□ -0.76
TTC39B-201ENST00000297615 NPFFR1Q9GZQ6 430 aa10.29□□□□□ -0.76
TTC39B-201ENST00000297615 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
TTC39B-201ENST00000297615 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
TTC39B-201ENST00000297615 FAM74A4Q5TZK3 123 aa10.28□□□□□ -0.76
TTC39B-201ENST00000297615 TRAV12-3A0A0B4J271 114 aa10.27□□□□□ -0.76
TTC39B-201ENST00000297615 B4DSR2 109 aa10.27□□□□□ -0.76
TTC39B-201ENST00000297615 ZNF48Q96MX3 618 aaPredicted RBP10.27□□□□□ -0.77
TTC39B-201ENST00000297615 MS4A6AQ9H2W1 248 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 UNC79Q9P2D8 2635 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 A0A087WWL8 130 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.77
TTC39B-201ENST00000297615 PCP4P48539 62 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 EMP1P54849 157 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 PPP1R14DQ9NXH3 145 aa10.27□□□□□ -0.77
TTC39B-201ENST00000297615 PSMG4Q5JS54 123 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 Q96MF0 132 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 K7ERJ3 54 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 SMIM17P0DL12 118 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 DEFB125Q8N687 156 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 OR2K2Q8NGT1 345 aa10.26□□□□□ -0.77
TTC39B-201ENST00000297615 TRBV7-1A0A0A6YYK4 115 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms