RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 UBE2E1P51965 193 aa8.67□□□□□ -1.02
DCLK1-201ENST00000255448 Q6ZR03 302 aa8.67□□□□□ -1.02
DCLK1-201ENST00000255448 RNF166Q96A37 237 aaPredicted RBP8.67□□□□□ -1.02
DCLK1-201ENST00000255448 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
DCLK1-201ENST00000255448 TANC1Q9C0D5 1861 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 PKDREJQ9NTG1 2253 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 DKK1O94907 266 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 CTRLP40313 264 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 YPEL4Q96NS1 127 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 PROK2Q9HC23 129 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 MUSTN1Q8IVN3 82 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 ZNF524Q96C55 264 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 TTC28Q96AY4 2481 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 CRLF1O75462 422 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 CREBBPQ92793 2442 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 I3L3M4 83 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
DCLK1-201ENST00000255448 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
DCLK1-201ENST00000255448 IGHV3-53P01767 116 aa8.65□□□□□ -1.02
DCLK1-201ENST00000255448 LY6HO94772 140 aa8.65□□□□□ -1.02
DCLK1-201ENST00000255448 TMEM14CQ9P0S9 112 aa8.65□□□□□ -1.02
DCLK1-201ENST00000255448 ICOSQ9Y6W8 199 aa8.65□□□□□ -1.02
DCLK1-201ENST00000255448 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
DCLK1-201ENST00000255448 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.03
DCLK1-201ENST00000255448 IGF2BP2-AS1Q96M15 143 aa8.65□□□□□ -1.03
DCLK1-201ENST00000255448 TSC2P49815 1807 aa8.65□□□□□ -1.03
DCLK1-201ENST00000255448 GTSF1Q8WW33 167 aa8.65□□□□□ -1.03
DCLK1-201ENST00000255448 ARHGAP21Q5T5U3 1957 aa8.65□□□□□ -1.03
DCLK1-201ENST00000255448 TRAV13-2A0A0B4J235 113 aa8.64□□□□□ -1.03
DCLK1-201ENST00000255448 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
DCLK1-201ENST00000255448 RPL32P62910 135 aaKnown RBP8.64□□□□□ -1.03
DCLK1-201ENST00000255448 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
DCLK1-201ENST00000255448 CRYGBP07316 175 aa8.64□□□□□ -1.03
DCLK1-201ENST00000255448 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
DCLK1-201ENST00000255448 C17orf77Q96MU5 243 aa8.64□□□□□ -1.03
DCLK1-201ENST00000255448 DSCR8Q96T75 97 aa8.64□□□□□ -1.03
DCLK1-201ENST00000255448 IGF2-ASQ6U949 168 aa8.64□□□□□ -1.03
DCLK1-201ENST00000255448 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
DCLK1-201ENST00000255448 RSPO1Q2MKA7 263 aaPredicted RBP8.63□□□□□ -1.03
DCLK1-201ENST00000255448 V9GYY9 64 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 TRGV1A0A0A0MS02 117 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 J3QLI3 93 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 TCL1BO95988 128 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 IGHV1-69P01742 117 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 PRB2P02812 416 aaPredicted RBP8.63□□□□□ -1.03
DCLK1-201ENST00000255448 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 IGLV1-44P01699 117 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 UQCRQO14949 82 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
DCLK1-201ENST00000255448 K7EM74 188 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 PSMB8P28062 276 aa8.63□□□□□ -1.03
DCLK1-201ENST00000255448 PLXNA4Q9HCM2 1894 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 E9PLD3 99 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 H3BRN7 92 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 IGHG2P01859 326 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 Q8N1Y9 231 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 RHPN1-AS1Q9BWJ2 59 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 HERVK_113P63121 156 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 MSRB1Q9NZV6 116 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 MUC6Q6W4X9 2439 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 M0QXV9 152 aa8.62□□□□□ -1.03
DCLK1-201ENST00000255448 F6UB75 175 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
DCLK1-201ENST00000255448 SRSF2Q01130 221 aaKnown RBP8.61□□□□□ -1.03
DCLK1-201ENST00000255448 ZNF407Q9C0G0 2248 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 NXPH4O95158 308 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 ODF1Q14990 250 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 THAP8Q8NA92 274 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 CLEC2BQ92478 149 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 TP53TG3Q9ULZ0 132 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 IGLV3-9A0A075B6K5 115 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 ZNF134P52741 427 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 TEX36Q5VZQ5 186 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 LINC00311Q8N616 119 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 FAM215AQ9Y5M1 114 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 NLRC5Q86WI3 1866 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
DCLK1-201ENST00000255448 H3BT86 120 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 PLA2G5P39877 138 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 ATP5G1P05496 136 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 YLPM1P49750 1951 aaKnown RBP8.6□□□□□ -1.03
DCLK1-201ENST00000255448 TRAV25A0A0B4J276 109 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 IGHV3-38A0A0C4DH36 116 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 OVOL3O00110 214 aa8.6□□□□□ -1.03
DCLK1-201ENST00000255448 LOXP28300 417 aaPredicted RBP8.59□□□□□ -1.03
DCLK1-201ENST00000255448 ZNF833PQ6ZTB9 187 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 Q96MF0 132 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 TEX49A0A1B0GTD5 131 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 SPRY2O43597 315 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 GTF3C1Q12789 2109 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 WDR86Q86TI4 376 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 C3orf22Q8N5N4 141 aa8.59□□□□□ -1.03
DCLK1-201ENST00000255448 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms