RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Pxmp4Q9JJW0 212 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Tmub1Q9JMG3 245 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Muc2Q80Z19 2680 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Ctxnd2A0A1B0GQX3 59 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Vmn1r160E9Q346 307 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Vmn1r123L7N270 307 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Syngr2O55101 224 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 P01728 117 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Ucp1P12242 307 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Svs5P30933 122 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Defa11P50709 85 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Ppp1r3cQ7TMB3 317 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr1474Q7TQQ8 314 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr132Q7TRI8 313 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Spink6Q8BT20 105 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Rnf182Q8C432 247 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Zg16Q8K0C5 167 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 FuomQ8R2K1 153 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr480Q8VEZ0 312 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr786Q8VFH8 312 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Vmn1r47Q9EQ51 310 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Trex2Q9R1A9 236 aa11.97□□□□□ -0.49
Nup88-202ENSMUST00000108530 Armcx4E9PWM3 2356 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 AsmtD3KU66 387 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Gm37240E9QAY5 252 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Gm21974F6W3F3 119 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Slc25a17O70579 307 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 P01659 112 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Fgf7P36363 194 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Chrna7P49582 502 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Atp5g2P56383 146 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Psg27Q497W2 474 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 LgalslbQ7TPX9 165 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr1465Q7TQR2 307 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr1290Q7TQX8 312 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Olfr1178Q7TR20 323 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Ell3Q80VR2 395 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 OtosQ8R448 89 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Ssbp3Q9D032 388 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Gtsf1Q9DAN6 167 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Dolpp1Q9JMF7 238 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Supt4h1bQ9Z199 117 aa11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Utp20Q5XG71 2788 aaKnown RBP11.96□□□□□ -0.49
Nup88-202ENSMUST00000108530 Scgb1b29D2XZ31 93 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Scgb1b20E9PWZ2 93 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Gm8677K9J7G9 307 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Wnt10aP70701 417 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 CluQ06890 448 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 EcscrQ3TZW0 214 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Zfp420Q7TMN8 578 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr223Q8VF69 319 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Rab5aQ9CQD1 215 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 ManbalQ9D8X0 85 aa11.96□□□□□ -0.5
Nup88-202ENSMUST00000108530 Ighv1-31A0A0A6YWK5 117 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 Fcrl6A1YIY0 268 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 Gm9925F6T2U3 160 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 P01790 122 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 YrdcQ3U5F4 280 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr1026Q7TR90 307 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 FibinQ9CQS3 217 aa11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 Eny2Q9JIX0 101 aaKnown RBP11.95□□□□□ -0.5
Nup88-202ENSMUST00000108530 Hoxa1P09022 331 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 NdnP25233 325 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Sesn1P58006 492 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Mcrip1Q3UGS4 97 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Cdkn2aQ64364 169 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Neil2Q6R2P8 329 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Sh3bgrl2Q8BG73 107 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 E130116L18RikQ8BMV6 101 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Tagln2Q9WVA4 199 aaKnown RBP11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Ighv5-8A0A075B676 92 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Pglyrp3A1A547 347 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Gm14412A2ARR7 526 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr177E9Q7W1 309 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Gm4791J3QQ14 102 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 TfpiO54819 306 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 ApcsP12246 224 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Gls2Q571F8 602 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Tle4Q62441 773 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Usf2Q64705 346 aaKnown RBP11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr399Q7TRX3 311 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Vmn1r66Q8K4I0 310 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Cds2Q99L43 444 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Ociad1Q9CRD0 247 aaKnown RBP11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Tep1P97499 2629 aa11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 FlncQ8VHX6 2726 aaKnown RBP11.94□□□□□ -0.5
Nup88-202ENSMUST00000108530 Trbv12-2A0A0B4J1H1 124 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Esp6A8R0U0 136 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr466E9Q2B9 308 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 CntfrO88507 372 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 P01788 123 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 PpyP10601 100 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Prrx1P63013 245 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Klf14Q19A41 325 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Arg1Q61176 323 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr1394Q8VET2 312 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr1271Q8VG62 305 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Olfr476Q8VGI4 310 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Lhfpl3Q9CTN8 222 aa11.93□□□□□ -0.5
Nup88-202ENSMUST00000108530 Ighv8-9A0A0G2JET1 119 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms