RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Cacna1hO88427 2365 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trav5-1A0A075B5Z7 114 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Olfr92L7N475 312 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Dll3O88516 592 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tnfrsf26P83626 204 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem241Q3UME2 297 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ms4a13Q5FWC3 203 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Olfr1380Q7TQT5 311 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 DutQ8VCG1 200 aaKnown RBP10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Prelid3aQ8VE85 172 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Bex1Q9R224 128 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Abca1P41233 2261 aa10.45□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm7714E9Q079 131 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Sigmar1O55242 223 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Hoxb3P09026 433 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 P18530 117 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Reg2Q08731 173 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmprss12Q3V0Q7 336 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tctn3Q8R2Q6 595 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Rnf7Q9WTZ1 113 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 9930021J03RikH3BKP8 2027 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tdrd6P61407 2134 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ighv1-43A0A0A6YXN5 117 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Bak1O08734 209 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ccsmst1Q6RUT7 136 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 B130006D01RikQ8BRH6 153 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 SowahbQ8BZW2 760 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Klf17Q8CFA7 341 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem186Q9CR76 216 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trav13n-4A0A0G2JG01 110 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 P06344 263 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Cacng7P62956 275 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 H2al1nQ497L1 109 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem256Q5F285 113 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem177Q8BPE4 311 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Pth2Q91W27 100 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm20854Q62461 227 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 2410004P03RikA0A087WQY2 205 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm35549A0A0N4SUS7 141 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Pglyrp3A1A547 347 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Il9P15247 144 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 RhodP97348 210 aa10.44□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trav6n-7A0A075B6A6 116 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trav12-1A0N8R1 115 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Mpig6bD7PDD4 242 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm12169F2Z474 250 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Nkx2-8O70584 235 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tpsb2P21845 276 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Itgb1bp1O35671 200 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Foxh1O88621 401 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Utp23Q9CX11 249 aaKnown RBP10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Q9D727 114 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ncor2Q9WU42 2472 aaKnown RBP10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gprin2D3Z1D7 455 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Adra2aQ01338 450 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ltbp3Q61810 1268 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gpr82Q8BZR0 328 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Mrpl55Q9CZ83 127 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 1700069L16RikQ9D9H5 109 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ttc3O88196 1979 aaKnown RBP10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Nwd2Q6P5U7 1742 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ighv5-9A0A075B5Q2 117 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Nat8b-psE0CYC6 232 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Fam3dP97805 223 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Olfr322Q5NCC8 327 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Zic3Q62521 466 aa10.43□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Klk7Q91VE3 249 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 1700013G24RikQ9DAC6 286 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Igkv16-104A0A0B4J1I1 116 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 EomesO54839 707 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Bcl6bO88282 474 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 P01679 107 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem50aQ9CXL1 157 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Fhl5Q9WTX7 284 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Mixl1Q9WUI0 231 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Heatr1G3X9B1 2143 aaKnown RBP10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Sumo2P61957 95 aaKnown RBP10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Defb28Q3V2L0 89 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Mrpl51Q9CPY1 128 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Marveld3Q9D956 376 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ssbp4Q3U4B1 363 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Olfr761Q7TRJ0 323 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Defb6Q91VD6 63 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem178aQ9CZ16 297 aa10.42□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Abca7Q91V24 2159 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trav3-4A0A075B654 114 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Repin1Q5U4E2 545 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Mob4Q6PEB6 225 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Paqr4Q9JJE4 273 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Topaz1E5FYH1 1653 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Zfp831A2ADM8 1628 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Kif13bA0A286YCV9 1847 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Als2Q920R0 1651 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 P01629 112 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 C1ql2Q8CFR0 287 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Atp5lQ9CPQ8 103 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 ChodlQ9CXM0 273 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm42543A0A0G2JET4 117 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm933J3QPC1 141 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 SeboxP70368 190 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms