RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 DEFB1P60022 68 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BCP62807 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST2H2BEQ16778 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BHQ93079 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BNQ99877 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BMQ99879 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 LSM4Q9Y4Z0 139 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 IGHV7-4-1A0A0J9YVY3 117 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 INAFM1C9JVW0 142 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HBDP02042 147 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 DAD1P61803 113 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 GUSBP1Q15486 140 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 FAM90A2PQ658T7 463 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 LYPD6Q86Y78 171 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 E7EUB6 86 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 SRSF1Q07955 248 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 PDE6HQ13956 83 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 NIT1Q86X76 327 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 LYPD1Q8N2G4 141 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 MRPL27Q9P0M9 148 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 UQCR10Q9UDW1 63 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 TSSC4Q9Y5U2 329 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 PPBPP02775 128 aa7.96□□□□□ -1.13
SMARCA1-205ENST00000617310 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-205ENST00000617310 TRANK1O15050 2925 aa7.96□□□□□ -1.13
SMARCA1-205ENST00000617310 IGHV3-38A0A0C4DH36 116 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 A6NJY4 79 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 COX6CP09669 75 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 CHD9Q3L8U1 2897 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 LYL1P12980 280 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 SLC25A2Q9BXI2 301 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 CSTL1Q9H114 145 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 DPH3P1Q9H4G8 78 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 NCKAP5O14513 1909 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 FNDC10F2Z333 226 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 H3BRM9 83 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ERASQ7Z444 233 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 KIAA1549Q9HCM3 1950 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 PSCAO43653 123 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM256Q8N2U0 113 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM170AQ8WVE7 144 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 LINC01548A6NM66 108 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 K7EIM0 57 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 CDKN1BP46527 198 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 MS4A6AQ9H2W1 248 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 CTAG1AP78358 180 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 C5orf30Q96GV9 206 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ALKBH7Q9BT30 221 aaPredicted RBP7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ESM1Q9NQ30 184 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 SETXQ7Z333 2677 aaKnown RBP7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 H3BRN7 92 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 NPC2P61916 151 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR25Q96S07 402 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 CITED2Q99967 270 aaPredicted RBP7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 ZNF106Q9H2Y7 1883 aaKnown RBP7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 C5orf56Q8N8D9 126 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 A0A087WW49 117 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 C10orf142B7Z368 130 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 SIRPDQ9H106 197 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 PFN1P07737 140 aaKnown RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 MRPL16Q9NX20 251 aaKnown RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 TNRC18O15417 2968 aaPredicted RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 TRAV9-1A0A075B6T8 112 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 IGHV1OR15-1A0A075B7D0 117 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 A0A0J9YY99 117 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 A0A1B0GUS0 222 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 ADCYAP1P18509 176 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 C1orf194Q5T5A4 169 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 OR5A1Q8NGJ0 315 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 TRAV26-2A0A0B4J265 109 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 DYNAPQ8N1N2 210 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 GSN-AS1Q9NRJ2 163 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 CTSGP08311 255 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 Q6ZSR3 168 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TRBV24-1A0A075B6N3 115 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TRBV7-9A0A0J9YWB2 115 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PROP1O75360 226 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 DDTP30046 118 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 KRTAP10-9P60411 292 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 FOXE3Q13461 319 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms