RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SPATA45Q537H7 98 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM14EPQ6UXP3 125 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 IZUMO2Q6UXV1 221 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 CASC2Q6XLA1 102 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 LINC00305Q7Z4B0 112 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 OR8I2Q8N0Y5 310 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 C5orf17Q8NAS9 161 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 MORN4Q8NDC4 146 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 OR5A2Q8NGI9 324 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 NAT14Q8WUY8 206 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 CIB3Q96Q77 187 aaPredicted RBP0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 AMELYQ99218 206 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM138Q9NPI0 162 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 OTORQ9NRC9 128 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 BOKQ9UMX3 212 aaPredicted RBP0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 ZFP30Q9Y2G7 519 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 ASB4Q9Y574 426 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 MPC1Q9Y5U8 109 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 OVOS2A0A0G2JMS6 1433 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 FAM135BQ49AJ0 1406 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 MED13LQ71F56 2210 aa0.34□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV36DV7A0A075B6V5 113 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 TRAV2A0A0B4J234 112 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 A0A0J9YY99 117 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 LOC107984640A0A0U1RRK4 108 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 H3BMG7 143 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 H7BYZ3 331 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 NCR3O14931 201 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 UQCRQO14949 82 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 DEGS1O15121 323 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 IGLV3-1P01715 115 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 IGHV3-30P01768 117 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 IGHV3-30-5P0DP03 117 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 CCL4P13236 92 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 HIST1H1BP16401 226 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 ZNF25P17030 456 aaPredicted RBP0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 RPL22P35268 128 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 MIR22HGQ0VDD5 57 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 MORN2Q502X0 79 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 FOXI2Q6ZQN5 318 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 C3orf62Q6ZUJ4 267 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 LINC00269Q8N2A0 174 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 C10orf111Q8N326 155 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM229BQ8NBD8 167 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 OR4S1Q8NGB4 309 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 OR51A4Q8NGJ6 313 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 Q8TAT8 98 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 RMND5BQ96G75 393 aaPredicted RBP0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 CARD19Q96LW7 228 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 OBSCN-AS1Q96MR7 158 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 VPS25Q9BRG1 176 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 GGACTQ9BVM4 153 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 MRPL40Q9NQ50 206 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 TAS2R7Q9NYW3 318 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 MYO7AQ13402 2215 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 COL1A1P02452 1464 aaPredicted RBP0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 DSPPQ9NZW4 1301 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 ABCA1O95477 2261 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 ABCA4P78363 2273 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 DOCK2Q92608 1830 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 MUC2Q02817 5179 aa0.34□□□□□ -2.36
SMCHD1-206ENST00000581631 CTTNBP2Q8WZ74 1663 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 RREB1Q92766 1687 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 NWD2Q9ULI1 1742 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 OVOS2A0A0J9YW53 1432 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 PTPRGP23470 1445 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 OVOS2Q6IE36 1432 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 A0A1W2PPB8 328 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 A0A1W2PRS3 328 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 C9orf170A2RU37 121 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM189A5PLL7 270 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 BBIP1A8MTZ0 92 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 KIR3DP1A8MWS1 328 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 C5orf67F2Z3F1 127 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 PPYP01298 95 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 RBP4P02753 201 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 GYPBP06028 91 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 RPL7P18124 248 aaKnown RBP0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 PDE6GP18545 87 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 CRYGSP22914 178 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 RPS3P23396 243 aaKnown RBP eCLIP0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 QRFPP83859 136 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 PLGLB1Q02325 96 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 OR8B8Q15620 311 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 TCTE3Q8IZS6 198 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 MMGT1Q8N4V1 131 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 TCTEX1D1Q8N7M0 179 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 OR8J3Q8NGG0 315 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 PPDPFLQ8WWR9 84 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 CLEC2BQ92478 149 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 ZC2HC1AQ96GY0 325 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 SMIM7Q9BQ49 75 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 BATF3Q9NR55 127 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 CBLN4Q9NTU7 201 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 CALML5Q9NZT1 146 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 GSKIPQ9P0R6 139 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 JPT1Q9UK76 154 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 TRAPPC2LQ9UL33 140 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 PAIP2BQ9ULR5 123 aaKnown RBP0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 KDM6BO15054 1643 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms