RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 LCN15Q6UWW0 184 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 LYG2Q86SG7 212 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 TMEM35BQ8NCS4 154 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 ZNF439Q8NDP4 499 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 WFDC11Q8NEX6 87 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 C2orf50Q96LR7 162 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 LHFPL6Q9Y693 200 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 CMYA5Q8N3K9 4069 aa2.47□□□□□ -2.01
AC012409.1-202ENST00000558449 FRAS1Q86XX4 4008 aa2.46□□□□□ -2.01
AC012409.1-202ENST00000558449 CCDC88CQ9P219 2028 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 EFCAB10A6NFE3 127 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 HTR1AP08908 422 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 RPL19P84098 196 aaKnown RBP2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 KRR1Q13601 381 aaKnown RBP2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 ELOBQ15370 118 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 NNATQ16517 81 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 CCDC58Q4VC31 144 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 KHDC3LQ587J8 217 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 BRMS1LQ5PSV4 323 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 Q6Q795 121 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 ZNF720Q7Z2F6 126 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 TMED4Q7Z7H5 227 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 TRAPPC6BQ86SZ2 158 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 PHF13Q86YI8 300 aaPredicted RBP2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 TET1Q8NFU7 2136 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 OR11H6Q8NGC7 330 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 TVP23BQ9NYZ1 205 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 SMPXQ9UHP9 88 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 MYH9P35579 1960 aaKnown RBP2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 SORL1Q92673 2214 aa2.46□□□□□ -2.02
AC012409.1-202ENST00000558449 TRGV2A0A075B6R0 118 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 A0A1B0GV72 72 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 PVALEFA0A1B0GWK0 134 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 IFNA21P01568 189 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 CRPP02741 224 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 NBEAP1P0C6P0 100 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 CRYGAP11844 174 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 CRYBA4P53673 196 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 DHRS4L2Q6PKH6 230 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 OR5A1Q8NGJ0 315 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 LZICQ8WZA0 190 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 DDA1Q9BW61 102 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 OSTCQ9NRP0 149 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 NDUFAF1Q9Y375 327 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 CR1P17927 2039 aa2.45□□□□□ -2.02
AC012409.1-202ENST00000558449 ANK1P16157 1881 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 A0A0D9SG52 128 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 SMIM24O75264 130 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 YPEL3P61236 119 aaPredicted RBP2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 PSPHP78330 225 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 Q1T7F1 81 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 DPPA3Q6W0C5 159 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 LCA10Q71F78 164 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 BORCS5Q969J3 196 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 YIPF3Q9GZM5 350 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 COL7A1Q02388 2944 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 SDK1Q7Z5N4 2213 aa2.44□□□□□ -2.02
AC012409.1-202ENST00000558449 PDCD11Q14690 1871 aaKnown RBP2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 ANK3Q12955 4377 aaKnown RBP2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 MICAL3Q7RTP6 2002 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 IGKV1D-42A0A075B6H8 117 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 ZNF705BP0CI00 300 aaPredicted RBP2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 CD52P31358 61 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 TFAMQ00059 246 aaKnown RBP2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 POU6F1Q14863 301 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 Q6ZQT0 140 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 GOLT1AQ6ZVE7 132 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 DEFB128Q7Z7B8 93 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 GPR146Q96CH1 333 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 Q96M85 177 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 FREM1Q5H8C1 2179 aa2.43□□□□□ -2.02
AC012409.1-202ENST00000558449 TRAV4A0A0B4J268 109 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 TRAPPC13A5PLN9 417 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 C1orf196B1AJZ1 125 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 CLDN25C9JDP6 229 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 M0QZK8 103 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 HMGB3O15347 200 aaKnown RBP2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 ARPC5O15511 151 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 TCL1BO95988 128 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 CRHP06850 196 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 UBBP0CG47 229 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 COX6A1P12074 109 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 FKBP2P26885 142 aaKnown RBP2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 SNRPFP62306 86 aaKnown RBP2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 OR4E2Q8NGC2 313 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 ZNF563Q8TA94 476 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 TCEAL4Q96EI5 215 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 RNF122Q9H9V4 155 aa2.42□□□□□ -2.02
AC012409.1-202ENST00000558449 ASCC3Q8N3C0 2202 aaKnown RBP2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 ARL5CA6NH57 179 aa2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 F8W036 122 aa2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 C19orf84I3L1E1 186 aa2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 J3QRK9 145 aa2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 CTSDP07339 412 aaPredicted RBP2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 CXCL8P10145 99 aa2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 SPI1P17947 270 aa2.41□□□□□ -2.02
AC012409.1-202ENST00000558449 SRIP30626 198 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms