RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 Q1T7F1 81 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 PAPPA-AS1Q5QFB9 102 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 ZNF714Q96N38 554 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
TDP1-215ENST00000556498 KLK15Q9H2R5 256 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 TMEM167BQ9NRX6 74 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 PSENENQ9NZ42 101 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 PLXNA1Q9UIW2 1896 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 CASP8AP2Q9UKL3 1982 aa4.65□□□□□ -1.66
TDP1-215ENST00000556498 SCN5AQ14524 2016 aa4.65□□□□□ -1.66
TDP1-215ENST00000556498 IGHV3OR16-9A0A0B4J2B5 98 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 TRBV30A0A0K0K1B3 111 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 H7BZZ5 65 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 FRMD6-AS1P0C7T7 363 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 ATP11AUNQ6ZP68 121 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 NKAPP1Q8N9T2 125 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 OVOL2Q9BRP0 275 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 ARRDC1-AS1Q9H2J1 176 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 FGF22Q9HCT0 170 aa4.65□□□□□ -1.67
TDP1-215ENST00000556498 VWA8A3KMH1 1905 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 SCN10AQ9Y5Y9 1956 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 CKAP5Q14008 2032 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 PAPPA2Q9BXP8 1791 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 IQCF6A8MYZ5 107 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 H0Y9J4 135 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 HMGN4O00479 90 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 COX7A2LO14548 114 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 SPINK4O60575 86 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 SLPIP03973 132 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 HMGN2P05204 90 aaKnown RBP4.64□□□□□ -1.67
TDP1-215ENST00000556498 S100A4P26447 101 aaKnown RBP4.64□□□□□ -1.67
TDP1-215ENST00000556498 ZNF80P51504 273 aaPredicted RBP4.64□□□□□ -1.67
TDP1-215ENST00000556498 KIAA0087Q14695 138 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 RUSC1-AS1Q66K80 236 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 GFRALQ6UXV0 394 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 FXYD5Q96DB9 178 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 ZNF71Q9NQZ8 489 aaPredicted RBP4.64□□□□□ -1.67
TDP1-215ENST00000556498 ANKRD36A6QL64 1941 aa4.64□□□□□ -1.67
TDP1-215ENST00000556498 ZNF236Q9UL36 1845 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 OBSL1O75147 1896 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 TRAV7A0A075B6U4 112 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 TRBV10-3A0A0K0K1G6 114 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 LINC01548A6NM66 108 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 C4orf51C9J302 202 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 IGKV1D-33P01593 117 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 IGKV1-33P01594 117 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 CFC1P0CG37 223 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 UBE2AP49459 152 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 RIGQ13278 110 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 CIRBPQ14011 172 aaKnown RBP4.63□□□□□ -1.67
TDP1-215ENST00000556498 PLGLAQ15195 96 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 ESRGQ1W209 222 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 MRPL51Q4U2R6 128 aaKnown RBP4.63□□□□□ -1.67
TDP1-215ENST00000556498 RNASE6Q93091 150 aaKnown RBP4.63□□□□□ -1.67
TDP1-215ENST00000556498 DIRC1Q969H9 104 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 NABP2Q9BQ15 211 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 WFDC6Q9BQY6 131 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 Q9HAA7 133 aa4.63□□□□□ -1.67
TDP1-215ENST00000556498 ANKRD12Q6UB98 2062 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 PRYO14603 147 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 RHOHQ15669 191 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 KISS1Q15726 138 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 GDF5OSQ5U4N7 250 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 GUSBP11Q6P575 273 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 ZNF826PQ6ZT77 177 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 FAM19A3Q7Z5A8 133 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.62□□□□□ -1.67
TDP1-215ENST00000556498 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 SHROOM3Q8TF72 1996 aa4.62□□□□□ -1.67
TDP1-215ENST00000556498 MED12LQ86YW9 2145 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 PLXNA3P51805 1871 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 LOC100131303A0A0U1RQF7 123 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 LOC389332A0A1B0GUA5 103 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.61□□□□□ -1.67
TDP1-215ENST00000556498 LINC01546A6NGU7 62 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 E7EQL1 145 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 PROP1O75360 226 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 PIRTP0C851 137 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 FUSP35637 526 aaKnown RBP eCLIP4.61□□□□□ -1.67
TDP1-215ENST00000556498 BLCAPP62952 87 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 C16orf47Q6ZP98 133 aaPredicted RBP4.61□□□□□ -1.67
TDP1-215ENST00000556498 NPCDR1Q9BY65 106 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 Q9Y3F1 56 aa4.61□□□□□ -1.67
TDP1-215ENST00000556498 POLR2AP24928 1970 aaKnown RBP4.6□□□□□ -1.67
TDP1-215ENST00000556498 IGKV2D-26A0A0A0MRZ7 120 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 IGKV6D-21A0A0A0MT36 114 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 HIGD1CA8MV81 97 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 KLLNB2CW77 178 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 ZNF22P17026 224 aaPredicted RBP4.6□□□□□ -1.67
TDP1-215ENST00000556498 RPS18P62269 152 aaKnown RBP4.6□□□□□ -1.67
TDP1-215ENST00000556498 SUMO4Q6EEV6 95 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 LYPD5Q6UWN5 251 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms