RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
XRCC3-211ENST00000555055 G3V4G9 280 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 PAX8Q06710 450 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 OR5A1Q8NGJ0 315 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 CCDC140Q96MF4 163 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 AP1S3Q96PC3 154 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 CCDC168Q8NDH2 2452 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 SMAD5-AS1Q9Y6J3 95 aa11.48□□□□□ -0.57
XRCC3-211ENST00000555055 IGHV1-69DA0A0B4J2H0 117 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 IGHV1-69P01742 117 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 SMIM17P0DL12 118 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 NEGR1Q7Z3B1 354 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 U3KQK5 164 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 SONP18583 2426 aaKnown RBP11.47□□□□□ -0.57
XRCC3-211ENST00000555055 CRIP1P50238 77 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 ZNF138P52744 262 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
XRCC3-211ENST00000555055 FAM110DQ8TAY7 271 aaPredicted RBP11.46□□□□□ -0.57
XRCC3-211ENST00000555055 PSG8Q9UQ74 426 aa11.46□□□□□ -0.57
XRCC3-211ENST00000555055 H3BUX3 64 aa11.46□□□□□ -0.58
XRCC3-211ENST00000555055 SMAD7O15105 426 aaKnown RBP11.46□□□□□ -0.58
XRCC3-211ENST00000555055 BLCAPP62952 87 aa11.46□□□□□ -0.58
XRCC3-211ENST00000555055 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.58
XRCC3-211ENST00000555055 PRSS3P2Q8NHM4 247 aa11.46□□□□□ -0.58
XRCC3-211ENST00000555055 ZNF502Q8TBZ5 544 aa11.46□□□□□ -0.58
XRCC3-211ENST00000555055 RABAC1Q9UI14 185 aa11.46□□□□□ -0.58
XRCC3-211ENST00000555055 CHD6Q8TD26 2715 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 HIF1ANQ9NWT6 349 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 APCP25054 2843 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 A0A096LNJ9 63 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 IGHV3-11P01762 117 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 CT45A10P0DMU9 189 aa11.45□□□□□ -0.58
XRCC3-211ENST00000555055 TMEM238LA0A1B0GVL6 79 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 NCR2O95944 276 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 RIPPLY3P57055 190 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 PSG3Q16557 428 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 ADAMTSL5Q6ZMM2 481 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 OR2K2Q8NGT1 345 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 VGLL1Q99990 258 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 TENM4Q6N022 2769 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 CSN3P07498 182 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 SRSF1Q07955 248 aaKnown RBP eCLIP11.44□□□□□ -0.58
XRCC3-211ENST00000555055 TMEM95Q3KNT9 176 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
XRCC3-211ENST00000555055 AAMDCQ9H7C9 122 aa11.44□□□□□ -0.58
XRCC3-211ENST00000555055 A0A0G2JLM5 398 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 H0Y8G0 127 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 K7EQM0 130 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 SAP30O75446 220 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 ERCC8Q13216 396 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 IGHG4P01861 327 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 KRTAP10-9P60411 292 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 KIR3DS1Q14943 382 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 MYO9AB2RTY4 2548 aa11.43□□□□□ -0.58
XRCC3-211ENST00000555055 MSMBP08118 114 aa11.42□□□□□ -0.58
XRCC3-211ENST00000555055 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
XRCC3-211ENST00000555055 CLPSL1A2RUU4 121 aa11.42□□□□□ -0.58
XRCC3-211ENST00000555055 FOXE3Q13461 319 aa11.42□□□□□ -0.58
XRCC3-211ENST00000555055 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
XRCC3-211ENST00000555055 MOB4Q9Y3A3 225 aa11.42□□□□□ -0.58
XRCC3-211ENST00000555055 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 HBDP02042 147 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 ZNF48Q96MX3 618 aaPredicted RBP11.41□□□□□ -0.58
XRCC3-211ENST00000555055 NF1P21359 2839 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 H3BUT2 72 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 TRGV3P03979 118 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
XRCC3-211ENST00000555055 SIGLEC8Q9NYZ4 499 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 HIGD1BQ9P298 99 aa11.41□□□□□ -0.58
XRCC3-211ENST00000555055 TMEM8BA6NDV4 472 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 ZNF80P51504 273 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-211ENST00000555055 DEFB1P60022 68 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 IGKV3-7A0A075B6H7 116 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 BUB3O43684 328 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-211ENST00000555055 FAM104BQ5XKR9 115 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 UNQ9165/PRO28630Q6UXU0 137 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
XRCC3-211ENST00000555055 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
XRCC3-211ENST00000555055 SCGB1A1P11684 91 aa11.39□□□□□ -0.59
XRCC3-211ENST00000555055 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
XRCC3-211ENST00000555055 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-211ENST00000555055 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-211ENST00000555055 Q6ZQT7 251 aa11.39□□□□□ -0.59
XRCC3-211ENST00000555055 OR8A1Q8NGG7 326 aa11.39□□□□□ -0.59
XRCC3-211ENST00000555055 PRELID3AQ96N28 172 aa11.39□□□□□ -0.59
XRCC3-211ENST00000555055 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
XRCC3-211ENST00000555055 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
XRCC3-211ENST00000555055 SNAI2O43623 268 aa11.38□□□□□ -0.59
XRCC3-211ENST00000555055 ATP5G2Q06055 141 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms