RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 SPCS1Q9Y6A9 102 aa14.57□□□□□ -0.08
MSLN-202ENST00000545450 SELENOKQ9Y6D0 94 aa14.57□□□□□ -0.08
MSLN-202ENST00000545450 POLQO75417 2590 aa14.57□□□□□ -0.08
MSLN-202ENST00000545450 IGKV2-40A0A087WW87 121 aaPredicted RBP14.56□□□□□ -0.08
MSLN-202ENST00000545450 TMEM238C9JI98 176 aa14.56□□□□□ -0.08
MSLN-202ENST00000545450 IGKV2D-40P01614 121 aaPredicted RBP14.56□□□□□ -0.08
MSLN-202ENST00000545450 MINOS1Q5TGZ0 78 aa14.56□□□□□ -0.08
MSLN-202ENST00000545450 ZMAT4Q9H898 229 aa14.56□□□□□ -0.08
MSLN-202ENST00000545450 MINOS1-NBL1R4GNA1 71 aa14.56□□□□□ -0.08
MSLN-202ENST00000545450 TENM4Q6N022 2769 aa14.56□□□□□ -0.08
MSLN-202ENST00000545450 FBLL1A6NHQ2 334 aaKnown RBP14.56□□□□□ -0.08
MSLN-202ENST00000545450 UBE2E1P51965 193 aa14.56□□□□□ -0.08
MSLN-202ENST00000545450 PTPN13Q12923 2485 aa14.55□□□□□ -0.08
MSLN-202ENST00000545450 GNG7O60262 68 aa14.55□□□□□ -0.08
MSLN-202ENST00000545450 ZNF80P51504 273 aaPredicted RBP14.55□□□□□ -0.08
MSLN-202ENST00000545450 KLF17Q5JT82 389 aaPredicted RBP14.55□□□□□ -0.08
MSLN-202ENST00000545450 RNF185Q96GF1 192 aa14.55□□□□□ -0.08
MSLN-202ENST00000545450 AJUBAQ96IF1 538 aa14.55□□□□□ -0.08
MSLN-202ENST00000545450 ZNF48Q96MX3 618 aaPredicted RBP14.55□□□□□ -0.08
MSLN-202ENST00000545450 HIGD1BQ9P298 99 aa14.55□□□□□ -0.08
MSLN-202ENST00000545450 FABP2P12104 132 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 BMI1P35226 326 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 WFDC3Q8IUB2 231 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 PSMG3-AS1Q96PY0 264 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 HHLA3Q9XRX5 114 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 S4R3C0 116 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 SMIM13P0DJ93 91 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 SMIM17P0DL12 118 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 SRSF2Q01130 221 aaKnown RBP14.54□□□□□ -0.08
MSLN-202ENST00000545450 SAMD5Q5TGI4 173 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 CCDC144NLQ6NUI1 221 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 CNFNQ9BYD5 112 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 MAP1LC3AQ9H492 121 aa14.54□□□□□ -0.08
MSLN-202ENST00000545450 NBPF19A0A087WUL8 3843 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 OOSP1A8MZH6 123 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 F8W735 103 aaPredicted RBP14.53□□□□□ -0.08
MSLN-202ENST00000545450 NBR2O15453 112 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 MFAP4P55083 255 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 HES1Q14469 280 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 ODF1Q14990 250 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 C18orf15Q96N68 181 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 IGKV2D-26A0A0A0MRZ7 120 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 NPIPB5A8MRT5 1133 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 NDUFA3O95167 84 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 FCER1GP30273 86 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 NPBQ8NG41 125 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 FANCD2OSQ96PS1 177 aa14.53□□□□□ -0.08
MSLN-202ENST00000545450 IGLV11-55A0A075B6I3 123 aa14.52□□□□□ -0.08
MSLN-202ENST00000545450 RPL7P18124 248 aaKnown RBP14.52□□□□□ -0.08
MSLN-202ENST00000545450 SAA4P35542 130 aa14.52□□□□□ -0.08
MSLN-202ENST00000545450 ZNF562Q6V9R5 426 aa14.52□□□□□ -0.08
MSLN-202ENST00000545450 ABCA12Q86UK0 2595 aa14.52□□□□□ -0.09
MSLN-202ENST00000545450 KRTAP10-9P60411 292 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 Q8TAT8 98 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 VGLL1Q99990 258 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 MSRB1Q9NZV6 116 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 CENPVL3A0A0U1RRI6 287 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 IGHG4P01861 327 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 LEPP41159 167 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 FXYD2P54710 66 aa14.51□□□□□ -0.09
MSLN-202ENST00000545450 NXT2Q9NPJ8 142 aaKnown RBP14.51□□□□□ -0.09
MSLN-202ENST00000545450 GCSHP23434 173 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 TM4SF20Q53R12 229 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 Q8N6K4 173 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 GAS8-AS1O95177 125 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 EVI2AP22794 236 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 EBI3Q14213 229 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 LINC01559Q495D7 138 aa14.5□□□□□ -0.09
MSLN-202ENST00000545450 DOPEY2Q9Y3R5 2298 aa14.49□□□□□ -0.09
MSLN-202ENST00000545450 NPFFO15130 113 aa14.49□□□□□ -0.09
MSLN-202ENST00000545450 TNFRSF6BO95407 300 aa14.49□□□□□ -0.09
MSLN-202ENST00000545450 C5orf64Q2M2E5 130 aa14.49□□□□□ -0.09
MSLN-202ENST00000545450 CHAC1Q9BUX1 264 aa14.49□□□□□ -0.09
MSLN-202ENST00000545450 SMAD5-AS1Q9Y6J3 95 aa14.49□□□□□ -0.09
MSLN-202ENST00000545450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSLN-202ENST00000545450 PHLDA1Q8WV24 401 aaPredicted RBP14.49□□□□□ -0.09
MSLN-202ENST00000545450 IGKCP01834 107 aa14.48□□□□□ -0.09
MSLN-202ENST00000545450 DSCR9P59020 149 aa14.48□□□□□ -0.09
MSLN-202ENST00000545450 TTTY13Q9BZ97 58 aa14.48□□□□□ -0.09
MSLN-202ENST00000545450 C21orf62Q9NYP8 219 aa14.48□□□□□ -0.09
MSLN-202ENST00000545450 IGHV3OR16-10A0A075B7F0 116 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 ORM1P02763 201 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 PRSS1P07477 247 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 TM2D2Q9BX73 214 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 SMPXQ9UHP9 88 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 TRBV25-1A0A075B6N4 114 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 FABP5P3A8MUU1 101 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 TMEM11P17152 192 aa14.47□□□□□ -0.09
MSLN-202ENST00000545450 NCBP2LA6PVI3 153 aaKnown RBP14.46□□□□□ -0.09
MSLN-202ENST00000545450 MSMBP08118 114 aa14.46□□□□□ -0.09
MSLN-202ENST00000545450 HLA-DRB4P13762 266 aa14.46□□□□□ -0.09
MSLN-202ENST00000545450 HLA-DMBP28068 263 aa14.46□□□□□ -0.09
MSLN-202ENST00000545450 IGFL4Q6B9Z1 124 aa14.46□□□□□ -0.09
MSLN-202ENST00000545450 TTC9CQ8N5M4 171 aa14.46□□□□□ -0.09
MSLN-202ENST00000545450 HLA-DRB4X5D2U9 266 aa14.46□□□□□ -0.09
MSLN-202ENST00000545450 ATP5LO75964 103 aa14.46□□□□□ -0.1
MSLN-202ENST00000545450 APCP25054 2843 aa14.45□□□□□ -0.1
MSLN-202ENST00000545450 TRAV40A0A0B4J280 105 aa14.45□□□□□ -0.1
MSLN-202ENST00000545450 DPM2O94777 84 aa14.45□□□□□ -0.1
MSLN-202ENST00000545450 PLA2G2AP14555 144 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms