RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 CHCHD2Q9Y6H1 151 aaPredicted RBP2.94□□□□□ -1.94
MDM2-229ENST00000543046 SCN10AQ9Y5Y9 1956 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 IGKV1-27A0A075B6S5 117 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 A0A096LNJ9 63 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 IGKV1D-43A0A0B4J1Z2 117 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 IGKV1-12A0A0C4DH73 117 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 LOC107984640A0A0U1RRK4 108 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 C19orf71A6NCJ1 209 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 RS1O15537 224 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 ATP5LO75964 103 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 IGKV1D-12P01611 117 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 HBDP02042 147 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 ACYP1P07311 99 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 LGALS1P09382 135 aaKnown RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 CECR9P0C854 216 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 FKBP2P26885 142 aaKnown RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 UBE2D1P51668 147 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 FGF12P61328 243 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 EIF4EBP1Q13541 118 aaPredicted RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 EBI3Q14213 229 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 CST6Q15828 149 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 RSPO1Q2MKA7 263 aaPredicted RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 DEFB134Q4QY38 66 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 MIC13Q5XKP0 118 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 ZNF493Q6ZR52 646 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 SLC25A48Q6ZT89 311 aaKnown RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 C8orf31Q8N9H6 132 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 C15orf53Q8NAA6 179 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 RFESDQ8TAC1 157 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 SPTSSAQ969W0 71 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 ELSPBP1Q96BH3 223 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 FLYWCH2Q96CP2 140 aaKnown RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 TIMD4Q96H15 378 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 ZNF488Q96MN9 340 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 ODF3Q96PU9 254 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 PRORYQ9H606 182 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 RPP21Q9H633 154 aaKnown RBP2.93□□□□□ -1.94
MDM2-229ENST00000543046 ZNF355PQ9NSJ1 428 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 LRRK1Q38SD2 2015 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 PTPRSQ13332 1948 aa2.93□□□□□ -1.94
MDM2-229ENST00000543046 COL4A6Q14031 1691 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 TRAV2A0A0B4J234 112 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 TRAV8-2A0A0B4J237 113 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 TRAV8-4A0A0B4J246 113 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 FRG2CA6NGY1 282 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 J3QLI3 93 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 K7EM74 188 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 K7ERJ3 54 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 LTAP01374 205 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 IGKCP01834 107 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 STATHP02808 62 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 CLPSP04118 112 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 COX7CP15954 63 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 MYCNOSP40205 109 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 CXCL5P42830 114 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 PSMB2P49721 201 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 TMEM258P61165 79 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 CACNG7P62955 275 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 PIGYQ3MUY2 71 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 C10orf128Q5T292 105 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 C9orf153Q5TBE3 101 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 MKXQ8IYA7 352 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 C10orf126Q8N4M7 172 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 FAM57AQ8TBR7 257 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 DPH3Q96FX2 82 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 TRGV9Q99603 122 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 MRPL20Q9BYC9 149 aaKnown RBP2.92□□□□□ -1.94
MDM2-229ENST00000543046 AMMECR1Q9Y4X0 333 aaPredicted RBP2.92□□□□□ -1.94
MDM2-229ENST00000543046 KIF25-AS1Q9Y6Z4 181 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 EXPH5Q8NEV8 1989 aa2.92□□□□□ -1.94
MDM2-229ENST00000543046 GOLGA4Q13439 2230 aaKnown RBP2.92□□□□□ -1.94
MDM2-229ENST00000543046 PTPRBP23467 1997 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 IGHV3OR15-7A0A075B7D8 119 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 A0A1B0GUT8 65 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 TINCRA0A1B0GVN0 87 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 WI2-2373I1.2A0A1W2PRP0 233 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 NDUFC2-KCTD14E9PQ53 114 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 H0YGG7 62 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 LGALS9O00182 355 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 PEX7O00628 323 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 SLC25A20O43772 301 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 DPM2O94777 84 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 TRACP01848 142 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 IGF1P05019 195 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
MDM2-229ENST00000543046 P0DMU3 169 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 FAM231AP0DMU4 169 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 FAM231CP0DMU5 169 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 COL8A2P25067 703 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 FCER1GP30273 86 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 SAA4P35542 130 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 GNG5P63218 68 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 TMEM170BQ5T4T1 132 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 MYO7BQ6PIF6 2116 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 Q6ZQT7 251 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 MIR17HGQ75NE6 70 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 AMN1Q8IY45 258 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 DRAM1Q8N682 238 aa2.91□□□□□ -1.94
MDM2-229ENST00000543046 ANKRD29Q8N6D5 301 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms