RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 OPRPNQ99935 248 aaPredicted RBP2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC50A1Q9BRV3 221 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 LY96Q9Y6Y9 160 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 MAST2Q6P0Q8 1798 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 COL1A1P02452 1464 aaPredicted RBP2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 C2orf16Q68DN1 1984 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 IGHV1OR21-1A0A087WYE8 117 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 PPYP01298 95 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 CKS2P33552 79 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 FOXL2NBQ6ZUU3 175 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 MARCH3Q86UD3 253 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF491Q8N8L2 437 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 RNASE6Q93091 150 aaKnown RBP2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 ABHD14BQ96IU4 210 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 TXNDC17Q9BRA2 123 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 DYNLRB1Q9NP97 96 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 RAI1Q7Z5J4 1906 aaPredicted RBP2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 IGLV9-49A0A0B4J1Y8 123 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 IBA57-AS1B1ANH7 110 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 BUB1B-PAK6H3BSN5 160 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 J3QRE1 110 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 IGKV1-5P01602 117 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 TRBV12-3P01733 135 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 CXCL6P80162 114 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 SERF2P84101 59 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 CIRBPQ14011 172 aaKnown RBP2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 GUSBP11Q6P575 273 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 IFI27L1Q96BM0 104 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 FAM218AQ96MZ4 157 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC00474Q9P2X8 69 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 DUOX1Q9NRD9 1551 aa2.3□□□□□ -2.04
SNRNP48-202ENST00000496946 TOGARAM1Q9Y4F4 1720 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 IGLV5-39A0A0G2JS06 123 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 A0A1B0GWA3 101 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 C12orf77C9JDV5 145 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 NDUFC1O43677 76 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 GNLYP22749 145 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 S100A4P26447 101 aaKnown RBP2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 S100A3P33764 101 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 UBE2AP49459 152 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 S100A7L2Q5SY68 101 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 GFRALQ6UXV0 394 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 GPHB5Q86YW7 130 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNRF1Q8ND25 227 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 WFDC5Q8TCV5 224 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 DIRC1Q969H9 104 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF714Q96N38 554 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC25A22Q9H936 323 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 PTPRBP23467 1997 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 TRBV25-1A0A075B6N4 114 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 A0A0G2JRQ6 117 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 TRBV10-2A0A0K0K1G8 114 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 LTAP01374 205 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 BLCAPP62952 87 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 RBMY1FQ15415 496 aaKnown RBP2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 RPS27LQ71UM5 84 aaKnown RBP2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 NPCDR1Q9BY65 106 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 C6orf106Q9H6K1 298 aaPredicted RBP2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 NRAPQ86VF7 1730 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 DLEC1Q9Y238 1755 aa2.29□□□□□ -2.04
SNRNP48-202ENST00000496946 KIF26BQ2KJY2 2108 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 ANKRD36A6QL64 1941 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 IGHV1OR15-9A0A0B4J2B8 117 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 A0A0B4J2C4 111 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 IGKV1-9A0A0C4DH69 117 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 A0A0J9YXV3 536 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 INAFM1C9JVW0 142 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 PEX7O00628 323 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 PSPHP1O15172 72 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 ATP6V0E1O15342 81 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 IGHV3-9P01782 118 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 NCBP2P52298 156 aaKnown RBP eCLIP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 SUPT4H1P63272 117 aaKnown RBP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 REG3AQ06141 175 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 RHOHQ15669 191 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 C16orf47Q6ZP98 133 aaPredicted RBP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 SDIM1Q6ZPB5 146 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 MDP1Q86V88 176 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 HIST1H4GQ99525 98 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF706Q9Y5V0 76 aaPredicted RBP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 TRIP12Q14669 1992 aaPredicted RBP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 KIAA2026Q5HYC2 2103 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 LRRK1Q38SD2 2015 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 KIAA1671Q9BY89 1806 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 CPAMD8Q8IZJ3 1885 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 TRBV7-1A0A0A6YYK4 115 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 TRBV5-4A0A0C4DH59 114 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 CTXND1A0A1B0GTU2 59 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC01549A6NIU2 74 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 H7BZZ5 65 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 J3QLW9 94 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 COX7A2P2O60397 106 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 280.8 ms