RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CD7P09564 240 aa2□□□□□ -2.09
CD46-213ENST00000471987 TPT1P13693 172 aaKnown RBP2□□□□□ -2.09
CD46-213ENST00000471987 DYNLT3P51808 116 aa2□□□□□ -2.09
CD46-213ENST00000471987 ATP5EP56381 51 aaPredicted RBP2□□□□□ -2.09
CD46-213ENST00000471987 CDK5R1Q15078 307 aa2□□□□□ -2.09
CD46-213ENST00000471987 ORMDL2Q53FV1 153 aa2□□□□□ -2.09
CD46-213ENST00000471987 ZNF678Q5SXM1 525 aa2□□□□□ -2.09
CD46-213ENST00000471987 BVES-AS1Q5T3Y7 98 aa2□□□□□ -2.09
CD46-213ENST00000471987 LGALS9CQ6DKI2 356 aa2□□□□□ -2.09
CD46-213ENST00000471987 SCXQ7RTU7 201 aa2□□□□□ -2.09
CD46-213ENST00000471987 GPHB5Q86YW7 130 aa2□□□□□ -2.09
CD46-213ENST00000471987 C15orf53Q8NAA6 179 aa2□□□□□ -2.09
CD46-213ENST00000471987 ZNF555Q8NEP9 628 aa2□□□□□ -2.09
CD46-213ENST00000471987 OR8A1Q8NGG7 326 aa2□□□□□ -2.09
CD46-213ENST00000471987 OR1J4Q8NGS1 313 aa2□□□□□ -2.09
CD46-213ENST00000471987 STAG3L4Q8TBR4 150 aa2□□□□□ -2.09
CD46-213ENST00000471987 MYOZ3Q8TDC0 251 aa2□□□□□ -2.09
CD46-213ENST00000471987 LSM10Q969L4 123 aaKnown RBP2□□□□□ -2.09
CD46-213ENST00000471987 PRELID3AQ96N28 172 aa2□□□□□ -2.09
CD46-213ENST00000471987 LINC00597Q9H2U6 94 aa2□□□□□ -2.09
CD46-213ENST00000471987 NDUFB11Q9NX14 153 aa2□□□□□ -2.09
CD46-213ENST00000471987 TAC3Q9UHF0 121 aa2□□□□□ -2.09
CD46-213ENST00000471987 LSM2Q9Y333 95 aaKnown RBP2□□□□□ -2.09
CD46-213ENST00000471987 DNAJC15Q9Y5T4 150 aa2□□□□□ -2.09
CD46-213ENST00000471987 F11RQ9Y624 299 aaKnown RBP2□□□□□ -2.09
CD46-213ENST00000471987 SPCS1Q9Y6A9 102 aa2□□□□□ -2.09
CD46-213ENST00000471987 UGGT1Q9NYU2 1555 aa2□□□□□ -2.09
CD46-213ENST00000471987 ADGRB3O60242 1522 aa2□□□□□ -2.09
CD46-213ENST00000471987 ABCC1P33527 1531 aa2□□□□□ -2.09
CD46-213ENST00000471987 DOCK2Q92608 1830 aa2□□□□□ -2.09
CD46-213ENST00000471987 C1orf167Q5SNV9 1468 aa2□□□□□ -2.09
CD46-213ENST00000471987 XRN1Q8IZH2 1706 aaKnown RBP2□□□□□ -2.09
CD46-213ENST00000471987 ANAPC1Q9H1A4 1944 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 OBSL1O75147 1896 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 COL27A1Q8IZC6 1860 aaPredicted RBP1.99□□□□□ -2.09
CD46-213ENST00000471987 IQGAP2Q13576 1575 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 NUP98P52948 1817 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 CFAP47Q6ZTR5 3102 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 DOCK8Q8NF50 2099 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 IGHV1-45A0A0A0MS14 117 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 IGKV1-9A0A0C4DH69 117 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 TRBV7-7A0A0K0K1E9 115 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 A0A1W2PPM0 123 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 C7orf77A4D0Y5 90 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 GRIFINA4D1Z8 144 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 RBAKDNA6NC62 111 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 TMEM235A6NFC5 223 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 C9JCJ5 164 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 BUB1B-PAK6H3BSN5 160 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 IGLV2-8P01709 118 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 HBDP02042 147 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 C1QAP02745 245 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 PRM2P04554 102 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 COX6A1P12074 109 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 CSN1S1P47710 185 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 FGF12P61328 243 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 LSM3P62310 102 aaKnown RBP1.99□□□□□ -2.09
CD46-213ENST00000471987 PMCHL1Q16048 86 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 LINC01554Q52M75 96 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 SPATA45Q537H7 98 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 C7orf65Q6ZTY9 151 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 ZNF101Q8IZC7 436 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 OR10AG1Q8NH19 301 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 PPDPFLQ8WWR9 84 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 MUCL1Q96DR8 90 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 IL36BQ9NZH7 164 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 LINC00588Q9Y4M8 146 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 ZMYM4Q5VZL5 1548 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 MAST2Q6P0Q8 1798 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 HEATR5AQ86XA9 2040 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 CCDC88CQ9P219 2028 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 MCM3APO60318 1980 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 PTPRBP23467 1997 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 ATP7BP35670 1465 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 RALGAPBQ86X10 1494 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 CHD8Q9HCK8 2581 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 OTOGLQ3ZCN5 2332 aa1.99□□□□□ -2.09
CD46-213ENST00000471987 PIKFYVEQ9Y2I7 2098 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 ATAD5Q96QE3 1844 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.98□□□□□ -2.09
CD46-213ENST00000471987 TICRRQ7Z2Z1 1910 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 TRBV24-1A0A075B6N3 115 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 TRAV19A0A0A6YYK7 116 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 GNGT2O14610 69 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 BGLAPP02818 100 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 INAFM2P0DMQ5 153 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 NFYAP23511 347 aaPredicted RBP1.98□□□□□ -2.09
CD46-213ENST00000471987 RNASE4P34096 147 aaKnown RBP1.98□□□□□ -2.09
CD46-213ENST00000471987 REG3AQ06141 175 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 FAM78AQ5JUQ0 283 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 ZNF660Q6AZW8 331 aaPredicted RBP1.98□□□□□ -2.09
CD46-213ENST00000471987 GUSBP11Q6P575 273 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 SBSPONQ8IVN8 264 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 Q8N2B8 174 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 DIRC1Q969H9 104 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 PMCHL2Q9BQD1 86 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 C20orf78Q9BR46 151 aa1.98□□□□□ -2.09
CD46-213ENST00000471987 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms