RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ZNF524Q96C55 264 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 C1orf210Q8IVY1 113 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 NRGNQ92686 78 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 RTTNQ86VV8 2226 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 GOLGB1Q14789 3259 aaKnown RBP7.69□□□□□ -1.18
SMAD9-203ENST00000399275 EPOPA6NHQ4 379 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 MYOD1P15172 320 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 UBE2E1P51965 193 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 OOSP1A8MZH6 123 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 FANCD2OSQ96PS1 177 aa7.69□□□□□ -1.18
SMAD9-203ENST00000399275 IMUPQ9GZP8 106 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 CFHR1Q03591 330 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 FAM216BQ8N7L0 139 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 PPDPFQ9H3Y8 114 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 OVOL1O14753 267 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 PROP1O75360 226 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 EFNA4P52798 201 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 LYPD1Q8N2G4 141 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 CACNA1IQ9P0X4 2223 aa7.68□□□□□ -1.18
SMAD9-203ENST00000399275 SRRM5B3KS81 715 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 H0YGX0 51 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 Q8TAT8 98 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 NDUFS5O43920 106 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 Q6ZSR3 168 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 TDRD6O60522 2096 aaKnown RBP7.67□□□□□ -1.18
SMAD9-203ENST00000399275 C11orf44Q8N8P7 122 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 TMEM167AQ8TBQ9 72 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 COL4A6Q14031 1691 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 PATE3B3GLJ2 98 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 JMJD7-PLA2G4BH0Y9G9 81 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 XGP55808 180 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 YPEL4Q96NS1 127 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 UPK3BQ9BT76 320 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 PLXNB3Q9ULL4 1909 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 PLXND1Q9Y4D7 1925 aa7.67□□□□□ -1.18
SMAD9-203ENST00000399275 SRRM4A7MD48 611 aaKnown RBP7.66□□□□□ -1.18
SMAD9-203ENST00000399275 TFF1P04155 84 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 B3GALT5-AS1P59052 145 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 UBE2BP63146 152 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 RHOHQ15669 191 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 LINC00173Q6ZV60 143 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 LGALS9O00182 355 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 LMO1P25800 156 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 TCL1BO95988 128 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 NREPQ16612 68 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 RBAKDNA6NC62 111 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 J3QLI3 93 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 RSPO1Q2MKA7 263 aaPredicted RBP7.66□□□□□ -1.18
SMAD9-203ENST00000399275 TEX36Q5VZQ5 186 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 CLEC19AQ6UXS0 136 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 CD177Q8N6Q3 437 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 SERP1Q9Y6X1 66 aa7.66□□□□□ -1.18
SMAD9-203ENST00000399275 TRGV3P03979 118 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 TRIP6Q15654 476 aaKnown RBP7.65□□□□□ -1.18
SMAD9-203ENST00000399275 HIST2H2BCQ6DN03 193 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 HIST2H2BDQ6DRA6 164 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 TMEM14BQ9NUH8 114 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 SPTBN1Q01082 2364 aaKnown RBP7.65□□□□□ -1.18
SMAD9-203ENST00000399275 GTSF1Q8WW33 167 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 MSRB2Q9Y3D2 182 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 TRAV4A0A0B4J268 109 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 TEX49A0A1B0GTD5 131 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 C11orf1Q9H5F2 150 aa7.65□□□□□ -1.18
SMAD9-203ENST00000399275 IGHV3-73A0A0B4J1V6 119 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 TRGV4A0A0C4DH28 118 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 E9PLD3 99 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 FAM201AQ5SY85 155 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 SMIM2Q9BVW6 85 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 METRNQ9UJH8 293 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 MPDZO75970 2070 aa7.65□□□□□ -1.19
SMAD9-203ENST00000399275 MDC1Q14676 2089 aaKnown RBP7.65□□□□□ -1.19
SMAD9-203ENST00000399275 GATA1P15976 413 aaPredicted RBP7.65□□□□□ -1.19
SMAD9-203ENST00000399275 ITLN2Q8WWU7 325 aaPredicted RBP7.65□□□□□ -1.19
SMAD9-203ENST00000399275 PDE6HQ13956 83 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 DYNAPQ8N1N2 210 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 A0A087WWL8 130 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 PINLYPA6NC86 204 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 RPL18AQ02543 176 aaKnown RBP7.64□□□□□ -1.19
SMAD9-203ENST00000399275 NEU4Q8WWR8 484 aaPredicted RBP7.64□□□□□ -1.19
SMAD9-203ENST00000399275 TTTY13Q9BZ97 58 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 LTAP01374 205 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 UBE2AP49459 152 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 MRPS36P82909 103 aaKnown RBP7.64□□□□□ -1.19
SMAD9-203ENST00000399275 TMEM75Q8N9X5 138 aa7.64□□□□□ -1.19
SMAD9-203ENST00000399275 FRMPD3Q5JV73 1810 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 ESPL1Q14674 2120 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 ZFP36L1Q07352 338 aaKnown RBP7.63□□□□□ -1.19
SMAD9-203ENST00000399275 CLEC2BQ92478 149 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 LINC00477Q96M19 166 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 RALGAPA1Q6GYQ0 2036 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 Q6Q795 121 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 RNF138Q8WVD3 245 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 DPM3Q9P2X0 92 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 PI4KAP42356 2102 aa7.63□□□□□ -1.19
SMAD9-203ENST00000399275 ZNF106Q9H2Y7 1883 aaKnown RBP7.62□□□□□ -1.19
SMAD9-203ENST00000399275 NXPH4O95158 308 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms