RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CFHR4Q92496 578 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 HIST1H4GQ99525 98 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 SMPXQ9UHP9 88 aa10.83□□□□□ -0.68
APOB-202ENST00000399256 F8W1H4 67 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 IGLV2-18A0A075B6J9 118 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 NDPQ00604 133 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 KLRD1Q13241 179 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 SPAG8Q99932 426 aaPredicted RBP10.82□□□□□ -0.68
APOB-202ENST00000399256 EFNA4P52798 201 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 LCNL1Q6ZST4 164 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 POLEQ07864 2286 aa10.82□□□□□ -0.68
APOB-202ENST00000399256 PRRG2O14669 202 aa10.81□□□□□ -0.68
APOB-202ENST00000399256 UCNP55089 124 aa10.81□□□□□ -0.68
APOB-202ENST00000399256 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
APOB-202ENST00000399256 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
APOB-202ENST00000399256 AGRNO00468 2067 aa10.81□□□□□ -0.68
APOB-202ENST00000399256 NCBP2LA6PVI3 153 aaKnown RBP10.8□□□□□ -0.68
APOB-202ENST00000399256 INSL3P51460 131 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 LINC01559Q495D7 138 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 C11orf21Q9P2W6 132 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 ARHGAP32A7KAX9 2087 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 IGKV3D-20A0A0C4DH25 116 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 IGHV3-66A0A0C4DH42 116 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 J3QR89 54 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 SRSF2Q01130 221 aaKnown RBP10.8□□□□□ -0.68
APOB-202ENST00000399256 SRSF1Q07955 248 aaKnown RBP eCLIP10.8□□□□□ -0.68
APOB-202ENST00000399256 LAGE3Q14657 143 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 CCDC144NLQ6NUI1 221 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 CTSGP08311 255 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 SCGB1A1P11684 91 aa10.8□□□□□ -0.68
APOB-202ENST00000399256 GAGE13Q4V321 117 aa10.79□□□□□ -0.68
APOB-202ENST00000399256 NPBQ8NG41 125 aa10.79□□□□□ -0.68
APOB-202ENST00000399256 A0A087WX48 190 aa10.79□□□□□ -0.68
APOB-202ENST00000399256 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
APOB-202ENST00000399256 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
APOB-202ENST00000399256 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
APOB-202ENST00000399256 CACNA1AO00555 2505 aa10.79□□□□□ -0.68
APOB-202ENST00000399256 IGHV3OR16-13A0A075B7E8 117 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 IGHV3-74A0A0B4J1X5 117 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 Q6ZQT7 251 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 NRACQ8N912 160 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 ATP5G2Q06055 141 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 RRN3P1Q2M238 152 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 Q8NA96 180 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 TAL2Q16559 108 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 SPATA25Q9BR10 227 aa10.78□□□□□ -0.68
APOB-202ENST00000399256 PIEZO2Q9H5I5 2752 aa10.77□□□□□ -0.69
APOB-202ENST00000399256 LY6HO94772 140 aa10.77□□□□□ -0.69
APOB-202ENST00000399256 SPOCK3Q9BQ16 436 aa10.77□□□□□ -0.69
APOB-202ENST00000399256 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
APOB-202ENST00000399256 TRBV7-3A0A075B6L6 115 aa10.76□□□□□ -0.69
APOB-202ENST00000399256 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
APOB-202ENST00000399256 CYSLTR1Q9Y271 337 aa10.76□□□□□ -0.69
APOB-202ENST00000399256 A0A1B0GV72 72 aa10.76□□□□□ -0.69
APOB-202ENST00000399256 PLNP26678 52 aa10.76□□□□□ -0.69
APOB-202ENST00000399256 CHD8Q9HCK8 2581 aa10.76□□□□□ -0.69
APOB-202ENST00000399256 A0A1B0GWB2 263 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 B9A039 149 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 AGPAT4-IT1Q9H0P7 198 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 IGHV7-4-1A0A0J9YVY3 117 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 ZNF502Q8TBZ5 544 aa10.75□□□□□ -0.69
APOB-202ENST00000399256 WNK2Q9Y3S1 2297 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.74□□□□□ -0.69
APOB-202ENST00000399256 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 SFTA2Q6UW10 78 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 LRBAP50851 2863 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 NDUFS8O00217 210 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 SPRY2O43597 315 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 SCGB2A1O75556 95 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 ZNF672Q499Z4 452 aaPredicted RBP10.74□□□□□ -0.69
APOB-202ENST00000399256 OR11H6Q8NGC7 330 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 CLUHP3Q96NS8 147 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 C20orf78Q9BR46 151 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 DCHS2Q6V1P9 2916 aa10.74□□□□□ -0.69
APOB-202ENST00000399256 F8VRH5 84 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 H7C1H1 209 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 CD3EP07766 207 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 RAB9AP51151 201 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 Q5PR19 223 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 MORN3Q6PF18 240 aaPredicted RBP10.73□□□□□ -0.69
APOB-202ENST00000399256 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 H3BVH4 76 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 BUB3O43684 328 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 APOMO95445 188 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
APOB-202ENST00000399256 J3KRW8 73 aa10.72□□□□□ -0.69
APOB-202ENST00000399256 HOXA3O43365 443 aaPredicted RBP10.72□□□□□ -0.69
APOB-202ENST00000399256 CKS1BP61024 79 aa10.72□□□□□ -0.69
APOB-202ENST00000399256 TMEM78Q5T7P6 136 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms