RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 LINC00299Q6ZSB3 139 aa1.4□□□□□ -2.19
RNU6-1339P-201ENST00000363574 PHRF1Q9P1Y6 1649 aaKnown RBP1.4□□□□□ -2.19
RNU6-1339P-201ENST00000363574 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
RNU6-1339P-201ENST00000363574 TRAV23DV6A0A075B6W5 121 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 EDF1O60869 148 aaKnown RBP1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 CKS2P33552 79 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 DNAJB13P59910 316 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SNRPD3P62318 126 aaKnown RBP1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SMCO1Q147U7 214 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 ASB16-AS1Q495Z4 193 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 CCSMST1Q4G0I0 132 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 AMELYQ99218 206 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 METTL1Q9UBP6 276 aaKnown RBP1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 NCOA6Q14686 2063 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 MYO18AQ92614 2054 aaKnown RBP1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 ARHGAP31Q2M1Z3 1444 aa1.39□□□□□ -2.19
RNU6-1339P-201ENST00000363574 IFITM5A6NNB3 132 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SMIM24O75264 130 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 HLA-DRB4P13762 266 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 HIST1H1BP16401 226 aaKnown RBP1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 AKR1D1P51857 326 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 PCBD1P61457 104 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 HIST1H1AQ02539 215 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SPATA45Q537H7 98 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 MAGOHBQ96A72 148 aaKnown RBP1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 LPAR5Q9H1C0 372 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 DNAJC15Q9Y5T4 150 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 HLA-DRB4X5D2U9 266 aa1.38□□□□□ -2.19
RNU6-1339P-201ENST00000363574 PEAK1Q9H792 1746 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 COL6A6A6NMZ7 2263 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 CHD3Q12873 2000 aaKnown RBP1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 IGHV1-24A0A0C4DH33 117 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 A6NN06 94 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 BBIP1A8MTZ0 92 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 CD3DP04234 171 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 ARPC4P59998 168 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 DEFB115Q30KQ5 88 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SBSPONQ8IVN8 264 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 TCTEX1D1Q8N7M0 179 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SMIM7Q9BQ49 75 aa1.37□□□□□ -2.19
RNU6-1339P-201ENST00000363574 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 KIAA1549LQ6ZVL6 1849 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 PNMA8CA0A1B0GUJ8 204 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 A0A1W2PPB8 328 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 A0A1W2PRS3 328 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 KIR3DP1A8MWS1 328 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 NCR3O14931 201 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 KDM5CP41229 1560 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SMIM21Q3B7S5 101 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 OCIAD2Q56VL3 154 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 C10orf111Q8N326 155 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 COMMD3Q9UBI1 195 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 WDR97A6NE52 1622 aa1.36□□□□□ -2.19
RNU6-1339P-201ENST00000363574 PTPRDP23468 1912 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 CDC42EP2O14613 210 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SULT1C4O75897 302 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 PDE6GP18545 87 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 EFNA4P52798 201 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 CSAG1Q6PB30 78 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 OR10AC1Q8NH08 325 aa1.35□□□□□ -2.19
RNU6-1339P-201ENST00000363574 IGHV3-30P01768 117 aa1.34□□□□□ -2.19
RNU6-1339P-201ENST00000363574 MPC1LP0DKB6 136 aa1.34□□□□□ -2.19
RNU6-1339P-201ENST00000363574 IGHV3-30-5P0DP03 117 aa1.34□□□□□ -2.19
RNU6-1339P-201ENST00000363574 KDELR1P24390 212 aa1.34□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SMIM3Q9BZL3 60 aa1.34□□□□□ -2.19
RNU6-1339P-201ENST00000363574 SLC35B3Q9H1N7 401 aa1.34□□□□□ -2.19
RNU6-1339P-201ENST00000363574 MYH1P12882 1939 aa1.34□□□□□ -2.2
RNU6-1339P-201ENST00000363574 MUC4Q99102 2169 aa1.34□□□□□ -2.2
RNU6-1339P-201ENST00000363574 SYNJ1O43426 1573 aa1.34□□□□□ -2.2
RNU6-1339P-201ENST00000363574 TET1Q8NFU7 2136 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 EVI2AP22794 236 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 FXYD4P59646 89 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 S100A12P80511 92 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 GLYATL3Q5SZD4 288 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 C3orf62Q6ZUJ4 267 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 OR8J3Q8NGG0 315 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 COPZ2Q9P299 210 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 BOKQ9UMX3 212 aaPredicted RBP1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 OTOGLQ3ZCN5 2332 aa1.33□□□□□ -2.2
RNU6-1339P-201ENST00000363574 OVOS2A0A0J9YW53 1432 aa1.32□□□□□ -2.2
RNU6-1339P-201ENST00000363574 OVOS2Q6IE36 1432 aa1.32□□□□□ -2.2
RNU6-1339P-201ENST00000363574 IGLC6P0CF74 106 aa1.32□□□□□ -2.2
RNU6-1339P-201ENST00000363574 PLGLB1Q02325 96 aa1.32□□□□□ -2.2
RNU6-1339P-201ENST00000363574 IDO2Q6ZQW0 420 aa1.32□□□□□ -2.2
RNU6-1339P-201ENST00000363574 ANK1P16157 1881 aa1.32□□□□□ -2.2
RNU6-1339P-201ENST00000363574 HELZ2Q9BYK8 2649 aaKnown RBP1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 GYPBP06028 91 aa1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 ADCYAP1P18509 176 aa1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 RPL37AP61513 92 aaKnown RBP1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 CLLU1Q5K131 121 aa1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 MMGT1Q8N4V1 131 aa1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 PTPRGP23470 1445 aa1.31□□□□□ -2.2
RNU6-1339P-201ENST00000363574 CTTNBP2Q8WZ74 1663 aa1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 NUPR2A6NF83 97 aa1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 M0R2Z0 102 aa1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 IGF2P01344 180 aa1.3□□□□□ -2.2
RNU6-1339P-201ENST00000363574 TSPAN19P0C672 248 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms