RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 U3KQK5 164 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV1-2P23083 117 aa10.15□□□□□ -0.79
VAMP4-201ENST00000236192 UCNP55089 124 aa10.15□□□□□ -0.79
VAMP4-201ENST00000236192 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.79
VAMP4-201ENST00000236192 LOC107984640A0A0U1RRK4 108 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 IGHG2P01859 326 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 NUP210LQ5VU65 1888 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 KIF26AQ9ULI4 1882 aaPredicted RBP10.14□□□□□ -0.79
VAMP4-201ENST00000236192 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 IGKV1OR2-108A0A075B7D4 117 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 IGHV3-49A0A0A0MS15 119 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 OVOL1O14753 267 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 RASL10AQ92737 203 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 FGF23Q9GZV9 251 aaPredicted RBP10.14□□□□□ -0.79
VAMP4-201ENST00000236192 WDR90Q96KV7 1748 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 FAM236DA0A1B0GTK5 79 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 FAM236CP0DP71 79 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 ZNF134P52741 427 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 BAALCQ8WXS3 180 aa10.14□□□□□ -0.79
VAMP4-201ENST00000236192 CABIN1Q9Y6J0 2220 aa10.13□□□□□ -0.79
VAMP4-201ENST00000236192 SIGLEC9Q9Y336 463 aa10.13□□□□□ -0.79
VAMP4-201ENST00000236192 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
VAMP4-201ENST00000236192 ESPL1Q14674 2120 aa10.13□□□□□ -0.79
VAMP4-201ENST00000236192 TRAV17A0A0B4J275 112 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 CRIPAKQ8N1N5 446 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 NBR2O15453 112 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 C10orf105Q8TEF2 133 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 CLEC2BQ92478 149 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 GHRHP01286 108 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 HES7Q9BYE0 225 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
VAMP4-201ENST00000236192 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 ZNF876PQ49A33 203 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 B3GALT5-AS1P59052 145 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 Q6ZQT7 251 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 LINC00477Q96M19 166 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 ZNF833PQ6ZTB9 187 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 POLR2AP24928 1970 aaKnown RBP10.11□□□□□ -0.79
VAMP4-201ENST00000236192 RTTNQ86VV8 2226 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 SIGLEC15Q6ZMC9 328 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
VAMP4-201ENST00000236192 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
VAMP4-201ENST00000236192 SERP2Q8N6R1 65 aa10.1□□□□□ -0.79
VAMP4-201ENST00000236192 C20orf173Q96LM9 149 aa10.1□□□□□ -0.79
VAMP4-201ENST00000236192 KIAA2026Q5HYC2 2103 aa10.1□□□□□ -0.79
VAMP4-201ENST00000236192 TCF20Q9UGU0 1960 aaKnown RBP10.1□□□□□ -0.79
VAMP4-201ENST00000236192 DTX1Q86Y01 620 aa10.1□□□□□ -0.79
VAMP4-201ENST00000236192 SRRM4A7MD48 611 aaKnown RBP10.1□□□□□ -0.79
VAMP4-201ENST00000236192 CXCL5P42830 114 aa10.1□□□□□ -0.79
VAMP4-201ENST00000236192 COL4A4P53420 1690 aaPredicted RBP10.1□□□□□ -0.79
VAMP4-201ENST00000236192 SLC25A45Q8N413 288 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 RNF152Q8N8N0 203 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 IGFBPL1Q8WX77 278 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 C17orf58Q2M2W7 97 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 SLC25A29Q8N8R3 303 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 AJUBAQ96IF1 538 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 CLEC19AQ6UXS0 136 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 Q8N7P7 452 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 RNF5Q99942 180 aa10.09□□□□□ -0.79
VAMP4-201ENST00000236192 TRBV30A0A0K0K1B3 111 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 PROK2Q9HC23 129 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 F5P12259 2224 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
VAMP4-201ENST00000236192 MDFICQ9P1T7 246 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 MYO7AQ13402 2215 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 TRAV13-2A0A0B4J235 113 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 PSMB8P28062 276 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 LINC00158P58513 81 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 PRIMA1Q86XR5 153 aa10.08□□□□□ -0.8
VAMP4-201ENST00000236192 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 RHOHQ15669 191 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 UBE2D3P61077 147 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 UBE2D2P62837 147 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 C1orf210Q8IVY1 113 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 DPM3Q9P2X0 92 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 A0A0J9YY99 117 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 CRLF1O75462 422 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 CFHR4Q92496 578 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
VAMP4-201ENST00000236192 GAFA1Q96PS6 74 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 HHLA3Q9XRX5 114 aa10.07□□□□□ -0.8
VAMP4-201ENST00000236192 UBE2E1P51965 193 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 C9orf139Q6ZV77 190 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 SDK1Q7Z5N4 2213 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
VAMP4-201ENST00000236192 PFN2P35080 140 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 BRWD1-AS2P59051 145 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 WI2-2373I1.2A0A1W2PRP0 233 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 INS-IGF2F8WCM5 200 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 TMEM200BQ69YZ2 307 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms