RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Cdc34bA0A140T8I4 237 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Igkv4-51A0N8I8 119 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr177E9Q7W1 309 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 P01803 113 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Rab11aP62492 216 aaKnown RBP18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Pdlim4P70271 330 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Zfp386Q1WWJ5 626 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Asphd2Q80VP9 343 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Tspan9Q8BJU2 239 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 1810024B03RikQ8BWE1 200 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Q8VC23 124 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Dusp18Q8VE01 188 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr1444Q8VFX2 319 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Ms4a6cQ99N08 217 aa18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Ammecr1Q9JHT5 344 aaKnown RBP18.37■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Ighv1-81A0A075B5Y4 117 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 KhkP97328 298 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 ApohQ01339 345 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Tmem88bQ3TYP4 173 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Gm9Q3UKW5 162 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Ttc9cQ810A3 171 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Spink6Q8BT20 105 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 FuomQ8R2K1 153 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr338Q8VGK6 306 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Srd5a2Q99N99 254 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Smdt1Q9DB10 107 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Vmn1r47Q9EQ51 310 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Armcx4E9PWM3 2356 aa18.36■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Npas1P97459 594 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Npy1rQ04573 382 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr399Q7TRX3 311 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Gm26558Q8BLW8 286 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Pbp2Q8VIN1 187 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Bpifa5Q9CQX3 270 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Sft2d3Q9CSV6 209 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Srp19Q9D7A6 144 aa18.35■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Vmn1r113G3UWI8 307 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Vmn1r60G3UY47 300 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Chek1O35280 476 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 PhyhO35386 338 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Meox1P32442 253 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 NfybP63139 207 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Pate4Q09098 99 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 AgaQ64191 346 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Nabp2Q8R2Y9 212 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Trav4-2A0A075B638 110 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr284A0A0U1RP76 321 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Gm27021M0QWE2 156 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 F2rl2O08675 369 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Ren2P00796 401 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 P18530 117 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Hist1h1aP43275 213 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Dhrs2Q149L0 282 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 B020031M17RikQ3UT11 173 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Wfdc8Q4KUS1 273 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 AtraidQ6PGD0 223 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Lrrc20Q8CI70 184 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Zfp958Q99LG7 467 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 FibinQ9CQS3 217 aa18.34■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr1329L7MTV4 313 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Onecut1O08755 465 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 AipO08915 330 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Degs1O09005 323 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ccl2P10148 148 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 CrygcQ61597 174 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Scgb2b2Q6UGQ3 114 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Hoxc12Q8K5B8 280 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr877Q8VF62 311 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Xrcc3Q9CXE6 349 aa18.33■□□□□ 0.52
Scn1b-201ENSMUST00000098548 FlnaQ8BTM8 2647 aaKnown RBP18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ighv14-4A0A0A6YVR1 117 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 D930048N14RikA2AA67 225 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Cst7O89098 144 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Klhl8P59280 629 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Gm614Q3V2K1 191 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr328Q5NCD3 310 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ppp1r3cQ7TMB3 317 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Rab11fip5Q8R361 645 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr1368Q8VFG3 314 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr639Q8VGY8 316 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Q9CRC3 126 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Hdhd3Q9CYW4 251 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Vmn1r54Q9EPB8 315 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 RhcgQ9QXP0 498 aa18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 StrapQ9Z1Z2 350 aaKnown RBP18.32■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Gm37797A0A1D5RLC8 261 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Fcrl6A1YIY0 268 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ovol3D3YYM0 189 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Gm17669F6QL70 154 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Arf6P62331 175 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Gfra1P97785 468 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 CebpdQ00322 268 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ccsmst1Q6RUT7 136 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Vkorc1l1Q6TEK5 176 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Cd200r4Q6XJV4 270 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr1290Q7TQX8 312 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Gpr4Q8BUD0 365 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Vmn1r225Q8R2A5 298 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Pttg1Q9CQJ7 199 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 1700029F12RikQ9CRB4 147 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms