RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Btbd17Q9DB72 478 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Slurp1Q9Z0K7 110 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Apc2Q9Z1K7 2274 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Igkv19-93A0A0G2JFZ3 115 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Olfr779E9PUS9 130 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Gfra3O35118 397 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Mtco2P00405 227 aaKnown RBP15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 P01630 113 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 P04946 108 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Ren1P06281 402 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Sssca1P56873 199 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Rtl4Q3URY0 304 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Olfr25Q7TRD6 313 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Olfr1009Q8VFK1 314 aa15.47■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Tm4sf19E9Q9H8 206 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 P01790 122 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 H2-M10.4Q85ZW8 331 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Olfr124Q8VGW6 315 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Znrf1Q91V17 227 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Rab31Q921E2 194 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Lsm4Q9QXA5 137 aaKnown RBP15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 Dscaml1Q4VA61 2053 aa15.46■□□□□ 0.07
Shkbp1-201ENSMUST00000003857 TprF6ZDS4 2431 aaKnown RBP15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gm21882J3QN86 361 aa15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ifna4P07351 186 aa15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Cnn1Q08091 297 aaKnown RBP15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Btf3Q64152 204 aaKnown RBP15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Rer1Q9CQU3 196 aaKnown RBP15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Mlst8Q9DCJ1 326 aa15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Cml1Q9JIZ0 222 aa15.46■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ighv1-19A0A0A6YWX0 117 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ighv7-2A0A0A6YX91 119 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ighv9-3A0A0B4J1J5 117 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Fndc10A2A9Q0 223 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Degs1O09005 323 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Tnfsf11O35235 316 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Edn1P22387 202 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Sfrp2P97299 295 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Pate4Q09098 99 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Smim7Q5RKS2 75 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 2810408A11RikQ6NSU2 435 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 HaaoQ78JT3 286 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Foxn4Q8K3Q3 521 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gtf3aQ8VHT7 364 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Pth2Q91W27 100 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Mrpl42Q9CPV3 142 aa15.45■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trav8n-2A0A075B633 112 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr1016A2ASV2 309 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr872E9PVW2 323 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Znf664Q4VA44 261 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Npy6rQ61212 371 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr153Q7TR48 307 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Pld4Q8BG07 503 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Pcgf1Q8R023 259 aaKnown RBP15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Immp1lQ9CQU8 166 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Slc25a15Q9WVD5 301 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Med12lQ8BQM9 2157 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Vmn1r78K7N608 313 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Dynlt3P56387 116 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Dynlrb1P62627 96 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Smug1Q6P5C5 279 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 RetnlgQ8K426 117 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gm27027S4R1M6 97 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Arfgef3Q3UGY8 2170 aa15.44■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Scgb1b10A0A087WPW0 93 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gm28171A0A087WQ19 227 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gm35060A0A140LIV7 231 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Crebl2Q32M00 123 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gm10803Q3TZS6 135 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Zfp872Q3UVL3 465 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Rhox10Q4TU83 196 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Q6DIA7 600 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Vma21Q78T54 101 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trbv1A0A0B4J1G7 116 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Esp6A8R0U0 136 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr609E9Q4X7 319 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Cst7O89098 144 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Zfp58P16372 489 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Btf3l4Q9CQH7 158 aaKnown RBP15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gpa33Q9JKA5 319 aa15.43■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Gm44501A8R0T9 150 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Tarm1B6A8R8 288 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Tnfsf12O54907 249 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 P06323 132 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Znf474Q6V5K9 347 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr1178Q7TR20 323 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ss18l1Q8BW22 402 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Klre1Q8CJC7 226 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Rbm7Q9CQT2 265 aaKnown RBP15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 NacaP70670 2187 aaKnown RBP15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trav6n-5A0A075B621 112 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trav6d-3A0A075B6B3 112 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trav6-5A0A075B6B5 112 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 G430095P16RikE9Q913 147 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 9130204L05RikG3UWB8 92 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 P04212 136 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trav6-3Q5R1E6 112 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Kcnip2Q9JJ69 270 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Pxmp4Q9JJW0 212 aa15.42■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Muc5acE9QAQ8 3455 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms