RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 PAX2Q02962 417 aa11.15□□□□□ -0.62
PCDHGA3-203ENST00000619750 SPG11Q96JI7 2443 aa11.15□□□□□ -0.63
PCDHGA3-203ENST00000619750 K7EP13 123 aa11.14□□□□□ -0.63
PCDHGA3-203ENST00000619750 IGHG4P01861 327 aa11.14□□□□□ -0.63
PCDHGA3-203ENST00000619750 CTSGP08311 255 aa11.14□□□□□ -0.63
PCDHGA3-203ENST00000619750 KLRB1Q12918 225 aa11.14□□□□□ -0.63
PCDHGA3-203ENST00000619750 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
PCDHGA3-203ENST00000619750 VKORC1Q9BQB6 163 aa11.14□□□□□ -0.63
PCDHGA3-203ENST00000619750 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 NDUFA3O95167 84 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 ZFP36P26651 326 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 CELSR2Q9HCU4 2923 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 TRAV30A0A087WSZ9 112 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 S100A7P31151 101 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 LYPD1Q8N2G4 141 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 RAB1BQ9H0U4 201 aa11.13□□□□□ -0.63
PCDHGA3-203ENST00000619750 G3V318 75 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 CEACAM3P40198 252 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 ZNF575Q86XF7 245 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 OR11H6Q8NGC7 330 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 MS4A6AQ9H2W1 248 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 PRORYQ9H606 182 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 TRAV26-2A0A0B4J265 109 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 FGF6P10767 208 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 NPBQ8NG41 125 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 CUBNO60494 3623 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
PCDHGA3-203ENST00000619750 IGHV3OR16-10A0A075B7F0 116 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 HBDP02042 147 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 CLEC3BP05452 202 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 JMJD8Q96S16 334 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 RNF5Q99942 180 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 H3BUT2 72 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
PCDHGA3-203ENST00000619750 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 TRGV3P03979 118 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 Q6AWC8 147 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 CLEC19AQ6UXS0 136 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 ODF3BA8MYP8 253 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 PRTN3P24158 256 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 LEPP41159 167 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 DEFB1P60022 68 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 PDE6HQ13956 83 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
PCDHGA3-203ENST00000619750 A0A1W2PPR1 153 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 CD5LO43866 347 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 SAP30O75446 220 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 C11orf21Q9P2W6 132 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 UFC1Q9Y3C8 167 aa11.09□□□□□ -0.63
PCDHGA3-203ENST00000619750 A0A1B0GW15 77 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 TMEM219Q86XT9 240 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 TTC9CQ8N5M4 171 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 SRSF8Q9BRL6 282 aaKnown RBP11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 ADORA2A-AS1P86434 159 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 U3KQK5 164 aa11.08□□□□□ -0.64
PCDHGA3-203ENST00000619750 PRSS1P07477 247 aa11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 Q8N9W7 124 aa11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDHGA3-203ENST00000619750 A1L4Q6 167 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 PAX8Q06710 450 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 IGKV3-7A0A075B6H7 116 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 LY6DQ14210 128 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 LGALS9BQ3B8N2 356 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
PCDHGA3-203ENST00000619750 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 K7ERJ3 54 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 IGF1P05019 195 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 BMI1P35226 326 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 CDKN1BP46527 198 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 TMEM158Q8WZ71 300 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 FOXC2Q99958 501 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms