RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MED13LQ71F56 2210 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 TMSB15BA0A087X1C1 80 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 A6NDX4 124 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 OR4C46A6NHA9 309 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 M0QZ24 198 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 NDUFA4O00483 81 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 TCAPO15273 167 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 PPBPP02775 128 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 TRGV3P03979 118 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 MSMBP08118 114 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
PABPC1-224ENST00000610907 ZNF138P52744 262 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 TMEM78Q5T7P6 136 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 Q6ZN92 141 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 C9orf47Q6ZRZ4 202 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 Q8TAT8 98 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 ZNF580Q9UK33 172 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 LAMTOR2Q9Y2Q5 125 aa8.03□□□□□ -1.12
PABPC1-224ENST00000610907 IGHV3OR16-8A0A075B7F1 116 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 TRAV8-2A0A0B4J237 113 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 TMEM213A2RRL7 107 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 ORM1P02763 201 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 PPIFP30405 207 aaKnown RBP8.02□□□□□ -1.13
PABPC1-224ENST00000610907 ARL3P36405 182 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 TWIST1Q15672 202 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 COL5A1-AS1Q5SY13 56 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 IGFL4Q6B9Z1 124 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 BRD3OSQ6XYD6 125 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 C8orf86Q6ZUL3 223 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 C9orf139Q6ZV77 190 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 ZNF575Q86XF7 245 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 NPFFR1Q9GZQ6 430 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 CACNA1BQ00975 2339 aa8.02□□□□□ -1.13
PABPC1-224ENST00000610907 B4DSR2 109 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 PRAC2D3DTV9 90 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 D6R8Y8 96 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 CSN3P07498 182 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 RNF224P0DH78 156 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 IGLL1P15814 213 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 TSPOP30536 169 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 ERCC8Q13216 396 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 MRPL51Q4U2R6 128 aaKnown RBP8.01□□□□□ -1.13
PABPC1-224ENST00000610907 PRR31Q5SQ13 230 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 ATOH7Q8N100 152 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 GLMPQ8WWB7 406 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 ZNF747Q9BV97 191 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 MS4A6AQ9H2W1 248 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 CHD6Q8TD26 2715 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV3OR16-10A0A075B7F0 116 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV4-30-2A0A087WSY4 118 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 A0A0G2JLM5 398 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 HSBP1L1C9JCN9 74 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV4-38-2P0DP08 117 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 CKS2P33552 79 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 LINC01545Q5VT33 79 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 AMN1Q8IY45 258 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 RNF182Q8N6D2 247 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 SIGLEC8Q9NYZ4 499 aa8.01□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV3-66A0A0C4DH42 116 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 H3BUX3 64 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 OVOL1O14753 267 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 PRB4P10163 310 aaPredicted RBP8□□□□□ -1.13
PABPC1-224ENST00000610907 SLC25A16P16260 332 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
PABPC1-224ENST00000610907 LINC00173Q6ZV60 143 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 IL17RELQ6ZVW7 336 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 C16orf92Q96LL3 132 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 LINC00477Q96M19 166 aa8□□□□□ -1.13
PABPC1-224ENST00000610907 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
PABPC1-224ENST00000610907 TCF21O43680 179 aa7.99□□□□□ -1.13
PABPC1-224ENST00000610907 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
PABPC1-224ENST00000610907 MAJINQ3KP22 176 aa7.99□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV4-4A0A075B6R2 117 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 TRBV7-9A0A0J9YWB2 115 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 ZNF207O43670 478 aaKnown RBP7.98□□□□□ -1.13
PABPC1-224ENST00000610907 CACNG7P62955 275 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 GAGE1Q13065 139 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 LY6EQ16553 131 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 DPF1Q92782 380 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 LINC00527Q9UJ94 153 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 ABCA2Q9BZC7 2435 aa7.98□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV3OR16-13A0A075B7E8 117 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV3-74A0A0B4J1X5 117 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 TMEM89A2RUT3 159 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 J3QLI3 93 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 HBDP02042 147 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 SAMD13Q5VXD3 122 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 SMIM15Q7Z3B0 74 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 RNF185Q96GF1 192 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 MAP1LC3AQ9H492 121 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
PABPC1-224ENST00000610907 AKAP6Q13023 2319 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 A0A096LNJ9 63 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 LOC389332A0A1B0GUA5 103 aa7.97□□□□□ -1.13
PABPC1-224ENST00000610907 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms