RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 NEDD8Q15843 81 aa0.76□□□□□ -2.29
TRAPPC8-212ENST00000584604 CASC2Q6XLA1 102 aa0.76□□□□□ -2.29
TRAPPC8-212ENST00000584604 Q6ZQY7 126 aa0.76□□□□□ -2.29
TRAPPC8-212ENST00000584604 OR5AK2Q8NH90 309 aa0.76□□□□□ -2.29
TRAPPC8-212ENST00000584604 PRELID3AQ96N28 172 aa0.76□□□□□ -2.29
TRAPPC8-212ENST00000584604 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
TRAPPC8-212ENST00000584604 ANKRD31Q8N7Z5 1873 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 NUP210Q8TEM1 1887 aaPredicted RBP0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 A0A0D9SG42 100 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 TRACP01848 142 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 SPTBP11277 2137 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 RPL37AP61513 92 aaKnown RBP0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 ATOH7Q8N100 152 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 CLEC2BQ92478 149 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 ZDBF2Q9HCK1 2354 aa0.75□□□□□ -2.29
TRAPPC8-212ENST00000584604 C3orf85A0A1B0GTC6 90 aa0.74□□□□□ -2.29
TRAPPC8-212ENST00000584604 TPT1P13693 172 aaKnown RBP0.74□□□□□ -2.29
TRAPPC8-212ENST00000584604 MAXP61244 160 aa0.74□□□□□ -2.29
TRAPPC8-212ENST00000584604 Q86TA4 180 aa0.74□□□□□ -2.29
TRAPPC8-212ENST00000584604 GRPEL2Q8TAA5 225 aa0.74□□□□□ -2.29
TRAPPC8-212ENST00000584604 E7EQ34 232 aa0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 FABP1P07148 127 aa0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 HRCT1Q6UXD1 115 aa0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 LINC00305Q7Z4B0 112 aa0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 RMND5BQ96G75 393 aaPredicted RBP0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 CCL19Q99731 98 aa0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 V9GYQ6 96 aa0.73□□□□□ -2.29
TRAPPC8-212ENST00000584604 TRBV27A0A0K0K1C4 114 aa0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 NEFHP12036 1026 aa0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 SPINT3P49223 89 aa0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 LPAR5Q9H1C0 372 aa0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 SMPXQ9UHP9 88 aa0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 MED31Q9Y3C7 131 aa0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 TCOF1Q13428 1488 aaKnown RBP0.72□□□□□ -2.29
TRAPPC8-212ENST00000584604 FRAS1Q86XX4 4008 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 DLC1Q96QB1 1528 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 A0A1B0GV72 72 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 FAM107AO95990 144 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 IGHV3-30P01768 117 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 SAA1P0DJI8 122 aaPredicted RBP0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 IGHV3-30-5P0DP03 117 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 C10orf111Q8N326 155 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 TEX29Q8N6K0 151 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 THEM6Q8WUY1 208 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 CIB3Q96Q77 187 aaPredicted RBP0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 LXNQ9BS40 222 aa0.71□□□□□ -2.3
TRAPPC8-212ENST00000584604 TRAV13-1A0A0B4J241 112 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 A6NN06 94 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 ZNF137PP52743 207 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 Q6ZS92 163 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 C5orf17Q8NAS9 161 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 AP1S3Q96PC3 154 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 NABP2Q9BQ15 211 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 CENPHQ9H3R5 247 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 FKBP11Q9NYL4 201 aa0.7□□□□□ -2.3
TRAPPC8-212ENST00000584604 H3BMG7 143 aa0.69□□□□□ -2.3
TRAPPC8-212ENST00000584604 CCL4P13236 92 aa0.69□□□□□ -2.3
TRAPPC8-212ENST00000584604 POLR2HP52434 150 aaKnown RBP0.69□□□□□ -2.3
TRAPPC8-212ENST00000584604 C6orf52Q5T4I8 152 aa0.69□□□□□ -2.3
TRAPPC8-212ENST00000584604 IZUMO2Q6UXV1 221 aa0.69□□□□□ -2.3
TRAPPC8-212ENST00000584604 TRBV7-6A0A0J9YX20 115 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 SULT1C4O75897 302 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 TMEM229BQ8NBD8 167 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 MORN4Q8NDC4 146 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 TRAPPC2LQ9UL33 140 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 TANC2Q9HCD6 1990 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 USP54Q70EL1 1684 aa0.68□□□□□ -2.3
TRAPPC8-212ENST00000584604 FAM135BQ49AJ0 1406 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 LOC107984156A0A0G2JMH3 177 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 LOC107986453A0A1B0GWG9 222 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 RPL7P18124 248 aaKnown RBP0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 SRP9P49458 86 aaKnown RBP0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 FXYD6P3P58550 94 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 ARL17AQ8IVW1 177 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 TCTEX1D1Q8N7M0 179 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 JPT1Q9UK76 154 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 PBRM1Q86U86 1689 aa0.67□□□□□ -2.3
TRAPPC8-212ENST00000584604 ASH1LQ9NR48 2969 aaKnown RBP0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 FGD6Q6ZV73 1430 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 ARL5CA6NH57 179 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 BBIP1A8MTZ0 92 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 IFNA21P01568 189 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 CRYGSP22914 178 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 TFAMQ00059 246 aaKnown RBP0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 CSAG1Q6PB30 78 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 MPC1Q9Y5U8 109 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 KIAA1549LQ6ZVL6 1849 aa0.66□□□□□ -2.3
TRAPPC8-212ENST00000584604 CTTNBP2Q8WZ74 1663 aa0.65□□□□□ -2.3
TRAPPC8-212ENST00000584604 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 LOC107984640A0A0U1RRK4 108 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 A0A1W2PPB8 328 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 A0A1W2PRS3 328 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 KIR3DP1A8MWS1 328 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 GYPBP06028 91 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 RPS3P23396 243 aaKnown RBP eCLIP0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 CAV3P56539 151 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 DNAJB13P59910 316 aa0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 SNRPD3P62318 126 aaKnown RBP0.65□□□□□ -2.31
TRAPPC8-212ENST00000584604 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms