RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 AEBP2Q6ZN18 517 aaPredicted RBP30.43■■■□□ 2.46
TRAPPC8-212ENST00000584604 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
TRAPPC8-212ENST00000584604 PHF23Q9BUL5 403 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC8-212ENST00000584604 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC8-212ENST00000584604 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
TRAPPC8-212ENST00000584604 FOXD1Q16676 465 aa23.93■■□□□ 1.42
TRAPPC8-212ENST00000584604 PPP6R1Q9UPN7 881 aa23.12■■□□□ 1.29
TRAPPC8-212ENST00000584604 ADRA2BP18089 450 aa23.08■■□□□ 1.29
TRAPPC8-212ENST00000584604 PIAS4Q8N2W9 510 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC8-212ENST00000584604 MSH5O43196 834 aa22.05■■□□□ 1.12
TRAPPC8-212ENST00000584604 PPP4R3CPQ6ZMV5 832 aa21.43■■□□□ 1.02
TRAPPC8-212ENST00000584604 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
TRAPPC8-212ENST00000584604 KCNA4P22459 653 aa21.05■□□□□ 0.96
TRAPPC8-212ENST00000584604 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
TRAPPC8-212ENST00000584604 MAPK8IP2Q13387 824 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC8-212ENST00000584604 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
TRAPPC8-212ENST00000584604 DMRT2Q9Y5R5 561 aa20.65■□□□□ 0.9
TRAPPC8-212ENST00000584604 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
TRAPPC8-212ENST00000584604 RNF216Q9NWF9 866 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC8-212ENST00000584604 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC8-212ENST00000584604 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
TRAPPC8-212ENST00000584604 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.81
TRAPPC8-212ENST00000584604 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
TRAPPC8-212ENST00000584604 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
TRAPPC8-212ENST00000584604 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
TRAPPC8-212ENST00000584604 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
TRAPPC8-212ENST00000584604 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
TRAPPC8-212ENST00000584604 ZBTB22O15209 634 aa19.38■□□□□ 0.69
TRAPPC8-212ENST00000584604 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
TRAPPC8-212ENST00000584604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAPPC8-212ENST00000584604 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC8-212ENST00000584604 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
TRAPPC8-212ENST00000584604 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
TRAPPC8-212ENST00000584604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC8-212ENST00000584604 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
TRAPPC8-212ENST00000584604 SAMD1Q6SPF0 538 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC8-212ENST00000584604 ATXN8OSP0DMR3 200 aa18.75■□□□□ 0.59
TRAPPC8-212ENST00000584604 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
TRAPPC8-212ENST00000584604 APLP2Q06481 763 aa18.61■□□□□ 0.57
TRAPPC8-212ENST00000584604 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC8-212ENST00000584604 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC8-212ENST00000584604 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC8-212ENST00000584604 CAPN15O75808 1086 aa18.28■□□□□ 0.52
TRAPPC8-212ENST00000584604 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC8-212ENST00000584604 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC8-212ENST00000584604 DSG3P32926 999 aa18.02■□□□□ 0.48
TRAPPC8-212ENST00000584604 POLA2Q14181 598 aa18■□□□□ 0.47
TRAPPC8-212ENST00000584604 ABCB7O75027 752 aa17.92■□□□□ 0.46
TRAPPC8-212ENST00000584604 ZBTB12Q9Y330 459 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC8-212ENST00000584604 FBLN2P98095 1184 aa17.71■□□□□ 0.43
TRAPPC8-212ENST00000584604 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC8-212ENST00000584604 FKBP8Q14318 412 aa17.47■□□□□ 0.39
TRAPPC8-212ENST00000584604 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
TRAPPC8-212ENST00000584604 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
TRAPPC8-212ENST00000584604 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
TRAPPC8-212ENST00000584604 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
TRAPPC8-212ENST00000584604 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
TRAPPC8-212ENST00000584604 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC8-212ENST00000584604 PROM2Q8N271 834 aa17.19■□□□□ 0.34
TRAPPC8-212ENST00000584604 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
TRAPPC8-212ENST00000584604 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
TRAPPC8-212ENST00000584604 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
TRAPPC8-212ENST00000584604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAPPC8-212ENST00000584604 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
TRAPPC8-212ENST00000584604 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC8-212ENST00000584604 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
TRAPPC8-212ENST00000584604 SPDYE1Q8NFV5 336 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC8-212ENST00000584604 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC8-212ENST00000584604 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
TRAPPC8-212ENST00000584604 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
TRAPPC8-212ENST00000584604 PRR29P0C7W0 189 aa16.5■□□□□ 0.23
TRAPPC8-212ENST00000584604 MIER1Q8N108 512 aa16.42■□□□□ 0.22
TRAPPC8-212ENST00000584604 IFNLR1Q8IU57 520 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC8-212ENST00000584604 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
TRAPPC8-212ENST00000584604 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
TRAPPC8-212ENST00000584604 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
TRAPPC8-212ENST00000584604 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
TRAPPC8-212ENST00000584604 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRAPPC8-212ENST00000584604 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC8-212ENST00000584604 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
TRAPPC8-212ENST00000584604 MNX1P50219 401 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC8-212ENST00000584604 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC8-212ENST00000584604 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
TRAPPC8-212ENST00000584604 SPOCK2Q92563 424 aa16.2■□□□□ 0.18
TRAPPC8-212ENST00000584604 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
TRAPPC8-212ENST00000584604 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
TRAPPC8-212ENST00000584604 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
TRAPPC8-212ENST00000584604 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC8-212ENST00000584604 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAPPC8-212ENST00000584604 NUBP1P53384 320 aa16.05■□□□□ 0.16
TRAPPC8-212ENST00000584604 PKD2Q13563 968 aa15.92■□□□□ 0.14
TRAPPC8-212ENST00000584604 GSE1Q14687 1217 aa15.91■□□□□ 0.14
TRAPPC8-212ENST00000584604 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
TRAPPC8-212ENST00000584604 FAM212AQ96EL1 285 aa15.89■□□□□ 0.13
TRAPPC8-212ENST00000584604 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
TRAPPC8-212ENST00000584604 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC8-212ENST00000584604 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
TRAPPC8-212ENST00000584604 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
TRAPPC8-212ENST00000584604 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC8-212ENST00000584604 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms