RNA–Protein interactions for RNA: ENST00000554576.2

HIGD1AP17-201, Transcript of HIG1 hypoxia inducible domain family member 1A pseudogene 17, humanhuman

BASIC

Gene HIGD1AP17, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1AP17-201ENST00000554576 BOKQ9UMX3 212 aaPredicted RBP0.72□□□□□ -2.29
HIGD1AP17-201ENST00000554576 A0A1B0GV72 72 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 ZNF727A8MUV8 499 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TRACP01848 142 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 CASC2Q6XLA1 102 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 Q86TA4 180 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 OR5AK2Q8NH90 309 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TRAPPC2LQ9UL33 140 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 BCL9O00512 1426 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 KIAA1107Q9UPP5 1409 aa0.71□□□□□ -2.3
HIGD1AP17-201ENST00000554576 PBRM1Q86U86 1689 aa0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 LOC107984156A0A0G2JMH3 177 aa0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TRBV30A0A0K0K1B3 111 aa0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 E7EQ34 232 aa0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TPT1P13693 172 aaKnown RBP0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 LINC00299Q6ZSB3 139 aa0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 ARL17AQ8IVW1 177 aa0.7□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TRAV13-1A0A0B4J241 112 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 A0A0J9YY99 117 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 IFNA21P01568 189 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 RPL7P18124 248 aaKnown RBP0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 MAXP61244 160 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 C5orf17Q8NAS9 161 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 THEM6Q8WUY1 208 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 SELENOSQ9BQE4 189 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 LXNQ9BS40 222 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 SMPXQ9UHP9 88 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 MED31Q9Y3C7 131 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 MUC4Q99102 2169 aa0.69□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TRBV27A0A0K0K1C4 114 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 H3BMG7 143 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 PGRMC1O00264 195 aaKnown RBP0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 PDE6GP18545 87 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 RPL37AP61513 92 aaKnown RBP0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 Q6ZQY7 126 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 NABP2Q9BQ15 211 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 CENPHQ9H3R5 247 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 DLC1Q96QB1 1528 aa0.68□□□□□ -2.3
HIGD1AP17-201ENST00000554576 FAM107AO95990 144 aa0.67□□□□□ -2.3
HIGD1AP17-201ENST00000554576 POLR2HP52434 150 aaKnown RBP0.67□□□□□ -2.3
HIGD1AP17-201ENST00000554576 FOXA3P55318 350 aaPredicted RBP0.67□□□□□ -2.3
HIGD1AP17-201ENST00000554576 SPINK9Q5DT21 86 aa0.67□□□□□ -2.3
HIGD1AP17-201ENST00000554576 CCL19Q99731 98 aa0.67□□□□□ -2.3
HIGD1AP17-201ENST00000554576 LPAR5Q9H1C0 372 aa0.67□□□□□ -2.3
HIGD1AP17-201ENST00000554576 K7EIL1 84 aa0.66□□□□□ -2.3
HIGD1AP17-201ENST00000554576 M0QZK8 103 aa0.66□□□□□ -2.3
HIGD1AP17-201ENST00000554576 SPINT3P49223 89 aa0.66□□□□□ -2.3
HIGD1AP17-201ENST00000554576 TMEM128Q5BJH2 165 aa0.66□□□□□ -2.3
HIGD1AP17-201ENST00000554576 CIB3Q96Q77 187 aaPredicted RBP0.66□□□□□ -2.3
HIGD1AP17-201ENST00000554576 ANK1P16157 1881 aa0.65□□□□□ -2.3
HIGD1AP17-201ENST00000554576 FER1L6Q2WGJ9 1857 aa0.65□□□□□ -2.3
HIGD1AP17-201ENST00000554576 A0A0D9SG42 100 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 LOC107984640A0A0U1RRK4 108 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SAA1P0DJI8 122 aaPredicted RBP0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SLC25A4P12235 298 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 CRYGSP22914 178 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 S100GP29377 79 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TFAMQ00059 246 aaKnown RBP0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SAMD13Q5VXD3 122 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 CSAG1Q6PB30 78 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TMEM229BQ8NBD8 167 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 MORN4Q8NDC4 146 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 AP1S3Q96PC3 154 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 CBLN4Q9NTU7 201 aa0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TCOF1Q13428 1488 aaKnown RBP0.65□□□□□ -2.31
HIGD1AP17-201ENST00000554576 ZCCHC11Q5TAX3 1644 aaKnown RBP0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 LOC107986453A0A1B0GWG9 222 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 BBIP1A8MTZ0 92 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 RPS3P23396 243 aaKnown RBP eCLIP0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 BLCAPP62952 87 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 QRFPP83859 136 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SMIM15Q7Z3B0 74 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 OR51A4Q8NGJ6 313 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 OR9Q1Q8NGQ5 310 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 BRK1Q8WUW1 75 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 CCDC115Q96NT0 180 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 USP54Q70EL1 1684 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 NINQ8N4C6 2090 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 FAM135BQ49AJ0 1406 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 FGD6Q6ZV73 1430 aa0.64□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TRBV7-6A0A0J9YX20 115 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 A0A1W2PPB8 328 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 A0A1W2PRS3 328 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 ARL5CA6NH57 179 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 KIR3DP1A8MWS1 328 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SULT1C4O75897 302 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 IGHV3-30P01768 117 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 IGHV3-30-5P0DP03 117 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 SNRPD3P62318 126 aaKnown RBP0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 C3orf62Q6ZUJ4 267 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 ATOH7Q8N100 152 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TMEM35BQ8NCS4 154 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 PLAC4Q8WY50 150 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TENM3Q9P273 2699 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 KIAA1549LQ6ZVL6 1849 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 TRPM7Q96QT4 1865 aa0.63□□□□□ -2.31
HIGD1AP17-201ENST00000554576 ZDBF2Q9HCK1 2354 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms