RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 PRB4P10163 310 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-204ENST00000547687 CDPF1Q6NVV7 123 aa12.71□□□□□ -0.37
CHMP1A-204ENST00000547687 FAM223BA6NKX1 122 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 APCSP02743 223 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 TRGV3P03979 118 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 Q0VG73 95 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 KIAA1644Q3SXP7 199 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 TCF24Q7RTU0 167 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 FAM223AQ8IWN6 122 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 TP53TG3Q9ULZ0 132 aa12.71□□□□□ -0.38
CHMP1A-204ENST00000547687 NPIPB6E9PJ23 425 aa12.7□□□□□ -0.38
CHMP1A-204ENST00000547687 RAB9AP51151 201 aa12.7□□□□□ -0.38
CHMP1A-204ENST00000547687 DNLZQ5SXM8 178 aa12.7□□□□□ -0.38
CHMP1A-204ENST00000547687 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 PCP4P48539 62 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 JOSD1Q15040 202 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 BAGE3Q86Y29 109 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 OR4B1Q8NGF8 309 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 ATP6V0BQ99437 205 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 ASCL2Q99929 193 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 GFRA4Q9GZZ7 299 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 CLPSL1A2RUU4 121 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 ZNF785A8K8V0 405 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 BUB3O43684 328 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 ZNF253O75346 499 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 TPPP2P59282 170 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 ATP5L2Q7Z4Y8 100 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 TMEM86BQ8N661 226 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 KLK15Q9H2R5 256 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
CHMP1A-204ENST00000547687 CFHR3Q02985 330 aa12.68□□□□□ -0.38
CHMP1A-204ENST00000547687 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
CHMP1A-204ENST00000547687 H3BUA1 57 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 SERF1AO75920 110 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 BRI3O95415 125 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 IGLV1-40P01703 118 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 PF4V1P10720 104 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 DEFA6Q01524 100 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 C21orf62-AS1Q17RA5 79 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 C16orf54Q6UWD8 224 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 OR2D3Q8NGH3 330 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 PGLYRP4Q96LB8 373 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 ZNF580Q9UK33 172 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 A0A1B0GXF2 115 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 GZMBP10144 247 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 ESDP10768 282 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 CAMPP49913 170 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 LINC00310P59036 64 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 SLAQ13239 276 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 OR10J3Q5JRS4 329 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 RBPMS2Q6ZRY4 209 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 METTL26Q96S19 204 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
CHMP1A-204ENST00000547687 A0A087X0K7 114 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 IGHV3-66A0A0C4DH42 116 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 F2Z2F3 143 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 CHEK1O14757 476 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 SRIP30626 198 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 LBHQ53QV2 105 aaPredicted RBP12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 IGFL4Q6B9Z1 124 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 ZNF747Q9BV97 191 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 IGKV2-40A0A087WW87 121 aaPredicted RBP12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 A0A1B0GV90 55 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 IGKV2D-40P01614 121 aaPredicted RBP12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 CRIP1P50238 77 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 PAFAH1B2P68402 229 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 C8orf49Q96NF6 230 aa12.66□□□□□ -0.38
CHMP1A-204ENST00000547687 ZNF207O43670 478 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 IGHG4P01861 327 aa12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 APOHP02749 345 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 HBBP68871 147 aa12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 Q6ZSV7 163 aa12.65□□□□□ -0.38
CHMP1A-204ENST00000547687 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 FBLL1A6NHQ2 334 aaKnown RBP12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 CT45A10P0DMU9 189 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 ARL3P36405 182 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 LCN12Q6JVE5 192 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 USMG5Q96IX5 58 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 ZNF705FA8MVS1 300 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 IGHV3-11P01762 117 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 SAPCD1Q5SSQ6 148 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 LINC01006Q8NI28 216 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 SSBP4Q9BWG4 385 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 U3KQE9 123 aa12.64□□□□□ -0.39
CHMP1A-204ENST00000547687 IGHV3-49A0A0A0MS15 119 aa12.63□□□□□ -0.39
CHMP1A-204ENST00000547687 RAB4AP20338 218 aa12.63□□□□□ -0.39
CHMP1A-204ENST00000547687 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-204ENST00000547687 HIST2H2BDQ6DRA6 164 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms