RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 GINS3Q9BRX5 216 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 OR2H1Q9GZK4 316 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 LYRM2Q9NU23 88 aaPredicted RBP-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 ABCA1O95477 2261 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 KDM6BO15054 1643 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 NCOR2Q9Y618 2525 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 BDP1A6H8Y1 2624 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 BBIP1A8MTZ0 92 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 CST7O76096 145 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 CSN2P05814 226 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 FABP4P15090 132 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 EVI2AP22794 236 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 CAPZBP47756 277 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 SNRPD3P62318 126 aaKnown RBP-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 ARF6P62330 175 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 MRPS36P82909 103 aaKnown RBP-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 Q5BKY6 102 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 GLYATL3Q5SZD4 288 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 FKBP1CQ5VVH2 108 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 DHRS4L2Q6PKH6 230 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 C3orf62Q6ZUJ4 267 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 ANGPTL5Q86XS5 388 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 LINC00269Q8N2A0 174 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 MNS1Q8NEH6 495 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 OR5AK2Q8NH90 309 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 PLEKHB2Q96CS7 222 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 MCEEQ96PE7 176 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 SH3BGRL3Q9H299 93 aa-0.03□□□□□ -2.41
KNTC1-213ENST00000542727 DLEC1Q9Y238 1755 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 RTL9Q8NET4 1388 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 DSPPQ9NZW4 1301 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 TMEM210A6NLX4 147 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 FXYD1O00168 92 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 PIAS1O75925 651 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 IGHV3-30P01768 117 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 IGHV3-30-5P0DP03 117 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 ZNF56Q15929 161 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 RTL8BQ17RB0 113 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 OR4B1Q8NGF8 309 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 FAM213BQ8TBF2 198 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 BORCS8Q96FH0 119 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 CHMP6Q96FZ7 201 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 RTL8AQ9BWD3 113 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 CACNA1HO95180 2353 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 HRNRQ86YZ3 2850 aaPredicted RBP-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 KIAA1107Q9UPP5 1409 aa-0.04□□□□□ -2.42
KNTC1-213ENST00000542727 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 ZFYVE26Q68DK2 2539 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 ARL5CA6NH57 179 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 A6NN06 94 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 KPNA4O00629 521 aaPredicted RBP-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 MFSD11O43934 449 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 IFNA1P01562 189 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 TRACP01848 142 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 GYPBP06028 91 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 S100A6P06703 90 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 FABP2P12104 132 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 NDUFA6P56556 154 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 RPL37P61927 97 aaKnown RBP-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 TMEM229BQ8NBD8 167 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 LINC00208Q96KT6 92 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 CIB3Q96Q77 187 aaPredicted RBP-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 TAF9BQ9HBM6 251 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 MED11Q9P086 117 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 LAMTOR3Q9UHA4 124 aa-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 HELZP42694 1942 aaKnown RBP-0.05□□□□□ -2.42
KNTC1-213ENST00000542727 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 TTC28Q96AY4 2481 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 TNS1Q9HBL0 1735 aaKnown RBP-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 LOC107984156A0A0G2JMH3 177 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 H3BQV1 296 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 RPL19P84098 196 aaKnown RBP-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 LTC4SQ16873 150 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 CSAG1Q6PB30 78 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 PHF5AQ7RTV0 110 aaKnown RBP-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 VMO1Q7Z5L0 202 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 ARL17AQ8IVW1 177 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 SMIM20Q8N5G0 67 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 TCTEX1D1Q8N7M0 179 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 OR5H6Q8NGV6 325 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 DYDC1Q8WWB3 177 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 CLEC2BQ92478 149 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 PROK2Q9HC23 129 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 BIN3Q9NQY0 253 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 OTORQ9NRC9 128 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 LRP1Q07954 4544 aaKnown RBP-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 TECPR2O15040 1411 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 MED13LQ71F56 2210 aa-0.06□□□□□ -2.42
KNTC1-213ENST00000542727 DLC1Q96QB1 1528 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 AHCTF1Q8WYP5 2266 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 A0A1W2PPB8 328 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 HIGD1CA8MV81 97 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 KIR3DP1A8MWS1 328 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 E2F6O75461 281 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 TPT1P13693 172 aaKnown RBP-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 GLRXP35754 106 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 TAS2R41P59536 307 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 DNAJB13P59910 316 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 GNG3P63215 75 aa-0.07□□□□□ -2.42
KNTC1-213ENST00000542727 FXYD3Q14802 87 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms