RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 LINC00299Q6ZSB3 139 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 OR4B1Q8NGF8 309 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 CCL4L1Q8NHW4 92 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 DIRC1Q969H9 104 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 CCL19Q99731 98 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 LAMTOR3Q9UHA4 124 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 RYR2Q92736 4967 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 ADGBQ8N7X0 1667 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 PTPRDP23468 1912 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 APCP25054 2843 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 SSPOA2VEC9 5147 aa0.26□□□□□ -2.37
RBM39-242ENST00000498280 MUC4Q99102 2169 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 YTHDC2Q9H6S0 1430 aaKnown RBP0.25□□□□□ -2.37
RBM39-242ENST00000498280 KIAA1107Q9UPP5 1409 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 TRAPPC8Q9Y2L5 1435 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 A0A0J9YY99 117 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 C3orf85A0A1B0GTC6 90 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 C5orf58C9J3I9 102 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 PDE6GP18545 87 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 S100A11P31949 105 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 ZNF137PP52743 207 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 KRTAP20-1Q3LI63 56 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 CASC2Q6XLA1 102 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 STX12Q86Y82 276 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 ATOH7Q8N100 152 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 OR5H6Q8NGV6 325 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 PLAC4Q8WY50 150 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 ISOC1Q96CN7 298 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 RMND5BQ96G75 393 aaPredicted RBP0.25□□□□□ -2.37
RBM39-242ENST00000498280 MCEEQ96PE7 176 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 SMR3AQ99954 134 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 ZGRF1Q86YA3 2104 aa0.25□□□□□ -2.37
RBM39-242ENST00000498280 ZDBF2Q9HCK1 2354 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 TRACP01848 142 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 CCL4P13236 92 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 KDELR1P24390 212 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 SDC2P34741 201 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 TMEM78Q5T7P6 136 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 HRCT1Q6UXD1 115 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 TEX29Q8N6K0 151 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 OR5AK2Q8NH90 309 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 CLEC2BQ92478 149 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 PRELID3AQ96N28 172 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 FAM103A1Q9BTL3 118 aaKnown RBP0.24□□□□□ -2.37
RBM39-242ENST00000498280 PCBD2Q9H0N5 130 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 LPAR5Q9H1C0 372 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 ASH1LQ9NR48 2969 aaKnown RBP0.24□□□□□ -2.37
RBM39-242ENST00000498280 FKBP11Q9NYL4 201 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 FAT4Q6V0I7 4981 aa0.24□□□□□ -2.37
RBM39-242ENST00000498280 ROCK1Q13464 1354 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 ANKRD31Q8N7Z5 1873 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 LOC107984156A0A0G2JMH3 177 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 A0A1W2PRE2 83 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 KRTAP2-3P0C7H8 128 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 BCL2P10415 239 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 NDUFA6P56556 154 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 SPINK7P58062 85 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 Q6ZS92 163 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 LINC00305Q7Z4B0 112 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 ARL17AQ8IVW1 177 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 C5orf17Q8NAS9 161 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 NABP2Q9BQ15 211 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 KRTAP2-4Q9BYR9 128 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 KRTAP2-1Q9BYU5 128 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 LAMTOR2Q9Y2Q5 125 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 RNF213Q63HN8 5207 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 DLC1Q96QB1 1528 aa0.23□□□□□ -2.37
RBM39-242ENST00000498280 CTTNBP2Q8WZ74 1663 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 TRBV27A0A0K0K1C4 114 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 SULT1C4O75897 302 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 IGHV3-30P01768 117 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 IGHV3-30-5P0DP03 117 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 TPT1P13693 172 aaKnown RBP0.22□□□□□ -2.37
RBM39-242ENST00000498280 MAXP61244 160 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 QRFPP83859 136 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 CSAG1Q6PB30 78 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 C10orf111Q8N326 155 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 GRPEL2Q8TAA5 225 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 CIB3Q96Q77 187 aaPredicted RBP0.22□□□□□ -2.37
RBM39-242ENST00000498280 CCDC32Q9BV29 185 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 PLAC8Q9NZF1 115 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 JPT1Q9UK76 154 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 TCOF1Q13428 1488 aaKnown RBP0.22□□□□□ -2.37
RBM39-242ENST00000498280 NCOR1O75376 2440 aa0.22□□□□□ -2.37
RBM39-242ENST00000498280 FGD6Q6ZV73 1430 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 NAV3Q8IVL0 2385 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 USP54Q70EL1 1684 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 DSPPQ9NZW4 1301 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 NUP210Q8TEM1 1887 aaPredicted RBP0.21□□□□□ -2.38
RBM39-242ENST00000498280 TRAV13-1A0A0B4J241 112 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 A6NN06 94 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 LY6G6CO95867 125 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 FABP1P07148 127 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 SNRPD3P62318 126 aaKnown RBP0.21□□□□□ -2.38
RBM39-242ENST00000498280 IZUMO2Q6UXV1 221 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 THEM6Q8WUY1 208 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 AP1S3Q96PC3 154 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 ATPIF1Q9UII2 106 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 TRAPPC2LQ9UL33 140 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms