RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 RPL35P42766 123 aaKnown RBP-0.18□□□□□ -2.44
PMS1-203ENST00000409593 CAV3P56539 151 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 VMA21Q3ZAQ7 101 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 SCGB2B2Q4G0G5 96 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 HACD4Q5VWC8 232 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 CSAG1Q6PB30 78 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 CASC2Q6XLA1 102 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 DIRC1Q969H9 104 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 SSR3Q9UNL2 185 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 CHD9Q3L8U1 2897 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 KDM6BO15054 1643 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 S100A6P06703 90 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 NEDD8Q15843 81 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 RTL8BQ17RB0 113 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 AKR1C8PQ5T2L2 129 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 XAF1Q6GPH4 301 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 IFT20Q8IY31 132 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 SMIM20Q8N5G0 67 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 NUP35Q8NFH5 326 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 OR4C12Q96R67 309 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 OR2H1Q9GZK4 316 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 KIAA1107Q9UPP5 1409 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 HIVEP3Q5T1R4 2406 aa-0.18□□□□□ -2.44
PMS1-203ENST00000409593 JMJD1CQ15652 2540 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 UBR5O95071 2799 aaPredicted RBP-0.19□□□□□ -2.44
PMS1-203ENST00000409593 CELSR2Q9HCU4 2923 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 KIAA1109Q2LD37 5005 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 H7BYZ3 331 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 LYRM1O43325 122 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 IFNA1P01562 189 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 FABP4P15090 132 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 GLRXP35754 106 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 GNG3P63215 75 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 FXYD3Q14802 87 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 ZNF56Q15929 161 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 DEFB132Q7Z7B7 95 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 PLEKHB2Q96CS7 222 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 LRTM1Q9HBL6 345 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 IL20Q9NYY1 176 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 TPRKBQ9Y3C4 175 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 DSPPQ9NZW4 1301 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 USP54Q70EL1 1684 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 ADGBQ8N7X0 1667 aa-0.19□□□□□ -2.44
PMS1-203ENST00000409593 UNC79Q9P2D8 2635 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 TECPR2O15040 1411 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 GPR31O00270 319 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 E2F6O75461 281 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 SULT1C4O75897 302 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 APOA2P02652 100 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 MT-ND6P03923 174 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 ARF6P62330 175 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 TMED2Q15363 201 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 ANGPTL5Q86XS5 388 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 MNS1Q8NEH6 495 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 CLEC2BQ92478 149 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 CEP19Q96LK0 163 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 EFCAB11Q9BUY7 163 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 PBDC1Q9BVG4 233 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 KIAA1549LQ6ZVL6 1849 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 UBR4Q5T4S7 5183 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 TRAPPC8Q9Y2L5 1435 aa-0.2□□□□□ -2.44
PMS1-203ENST00000409593 LOC101927531A0A1B0GV80 90 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 EVI2AP22794 236 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 RPS3P23396 243 aaKnown RBP eCLIP-0.21□□□□□ -2.44
PMS1-203ENST00000409593 IZUMO2Q6UXV1 221 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 C5orf56Q8N8D9 126 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 OR13C6PQ8NH95 151 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 BORCS8Q96FH0 119 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 CHMP6Q96FZ7 201 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 MYH2Q9UKX2 1941 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 TCOF1Q13428 1488 aaKnown RBP-0.21□□□□□ -2.44
PMS1-203ENST00000409593 EIF3AQ14152 1382 aaKnown RBP-0.21□□□□□ -2.44
PMS1-203ENST00000409593 C3orf85A0A1B0GTC6 90 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 CD3DP04234 171 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 PPP1R2P41236 205 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 TAS2R41P59536 307 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 MRPS25P82663 173 aaKnown RBP-0.21□□□□□ -2.44
PMS1-203ENST00000409593 SPINK13Q1W4C9 94 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 C5orf17Q8NAS9 161 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 PROK2Q9HC23 129 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 FKBP11Q9NYL4 201 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 UFC1Q9Y3C8 167 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
PMS1-203ENST00000409593 ANK1P16157 1881 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 NSD1Q96L73 2696 aaPredicted RBP-0.22□□□□□ -2.44
PMS1-203ENST00000409593 FGD6Q6ZV73 1430 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 RBBP6Q7Z6E9 1792 aaKnown RBP-0.22□□□□□ -2.44
PMS1-203ENST00000409593 TRDV1A0A1B0GX56 115 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 GABARAPH6UMI1 98 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 KPNA4O00629 521 aaPredicted RBP-0.22□□□□□ -2.44
PMS1-203ENST00000409593 ATP5HO75947 161 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 MRPS36P82909 103 aaKnown RBP-0.22□□□□□ -2.44
PMS1-203ENST00000409593 RPL19P84098 196 aaKnown RBP-0.22□□□□□ -2.44
PMS1-203ENST00000409593 MCEEQ96PE7 176 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 HOPXQ9BPY8 73 aaPredicted RBP-0.22□□□□□ -2.44
PMS1-203ENST00000409593 COMMD3Q9UBI1 195 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 MYH3P11055 1940 aa-0.22□□□□□ -2.44
PMS1-203ENST00000409593 ANKRD31Q8N7Z5 1873 aa-0.22□□□□□ -2.45
PMS1-203ENST00000409593 FAM135BQ49AJ0 1406 aa-0.22□□□□□ -2.45
PMS1-203ENST00000409593 A0A096LNT2 108 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms